| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1823 |
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| Symbol | phhR |
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| ID | 1183464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1990110 |
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| End bp | 1991675 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393198 |
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| Product | phenylalanine hydroxylase transcriptional activator PhhR |
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| Protein accession | NP_791647 |
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| Protein GI | 28869028 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.229512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA AGGTCCACTG CCAGAACCGC ATCGGCATTC TTCGTGACAT CCTCGATCTG
CTGGTCGCCT ATGGCGTCAA CGTGGCTCGC GGTGAAGTGG GCGGCGAGCA CGGTGACGCG
ATCTATCTGT TTTGCCCGAA CCTGATCAAC CTGCAGTTTC AGGCGTTGCG TCCGAAATTC
GAGGCGATCA CCGGCGTGTT CGGCGTCAAG CGCGTCGGGT TGATGCCCAG CGAGCGGCGG
CACATGGAAC TCAATGCCTT GCTCGGCGCG CTGGATTTTC CGGTGTTGTC CATCGACATG
GCCGGCGCCA TCGTTGCCGC CAACCGCGCC GCTGCGCAGT TGCTGGGGGT GCGGGTCGAT
GAAGTGCCGG GGATTGCGTT GTCGCGGTAT GCCGAGGACT TCGATCTGCC CGCGCTGGTG
CGTTCCAGTC AGTCGCGCAT CAACGGCCTG CGGGTCAAGG TGCGCGGTGA CGTGTTTCTA
GCCGACATCG CGCCGCTGCA GTCCGAACAC GACGACAGCG AGGCCATGGC CGGCGCCGTG
CTGACCCTGC ACCGCGCGGA CCGGGTCGGC GAGCGTATCT ATCATGTGCG CAAGCAGGAA
TTGCGCGGTT TCGACAGTAT CTTTCAGAGC TCGAAGGTCA TGGCTGCGGT GGTCCGCGAA
GCACGGCGCA TGGCACCGCT GGACGCGCCG TTGCTGATCG AAGGCGAAAC CGGCACCGGC
AAGGAGCTGC TGGCCCGCGC CTGCCACCTC GCCAGCCCGC GCGGCCAGTC ACCCTTGATG
GCCCTCAATT GTGCCGGGCT CTCGGAGTCC ATGGCCGAAA TCGAACTGTT CGGCTACGAG
CCCGGCGCGT TCGAGGGTGC GCGGGTTGAA GGTCGGCTGG GGCTGGTGGA GTTGACGGCG
GGCGGCACGT TGTTTCTGGA TGGCGTAGGT GAGCTGAGTG CGCGCATGCA GGCCAAGCTG
CTGCGCTTCA TTCAGGACGG CAGCTTTCGC CGGGTCGGCA GTGACGAAGA CATGTTTCTC
GACGTGCGGG TGATGTGTTC GACGCAGGTT GACCTCTCGC AGCTGTGCGC CAGAGGCGAG
TTCCGTCAGG ACCTCTACCA TCGCCTCAAT GTGCTGTCAC TGCACATCCC GCCGCTGCGC
GATTGTCTGG ACGGCCTTGA ACCGCTGGTG GAGCACTTTG TCGATCATGC CAGCCGTCAG
ATTGGCTGCT CGTTGCCACG TATGACGCCT GCCGCGCTAA AGCGTCTGAC CCAGTACCAT
TGGCCCGGCA ATGTCCGGCA ACTGGAAAAC GTATTGTTTC AGGCCGTTTC GCTGTGTGAC
GGCGGCAAGG TGCAGGCCGA GCATATTCGA TTGCCCGATT ACGGCGTGCG CCAGGGCCTG
AGCGAGGTGT CGCTGGAGGG TGGGCTGGAC GCGATTGTCG GCCGTTTTGA ACGGTCGGTT
CTGGAGCAGT TATATGCGCA TTACCCCAGC AGTCGTCAGT TAGGTAAACG CCTGGGTGTA
TCGCATACAA CCATTGCCAA CAAGTTACGC GACTATCAAA TAAGCAAGGA GGCAAAAACG
GATTAA
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| Protein sequence | MRIKVHCQNR IGILRDILDL LVAYGVNVAR GEVGGEHGDA IYLFCPNLIN LQFQALRPKF
EAITGVFGVK RVGLMPSERR HMELNALLGA LDFPVLSIDM AGAIVAANRA AAQLLGVRVD
EVPGIALSRY AEDFDLPALV RSSQSRINGL RVKVRGDVFL ADIAPLQSEH DDSEAMAGAV
LTLHRADRVG ERIYHVRKQE LRGFDSIFQS SKVMAAVVRE ARRMAPLDAP LLIEGETGTG
KELLARACHL ASPRGQSPLM ALNCAGLSES MAEIELFGYE PGAFEGARVE GRLGLVELTA
GGTLFLDGVG ELSARMQAKL LRFIQDGSFR RVGSDEDMFL DVRVMCSTQV DLSQLCARGE
FRQDLYHRLN VLSLHIPPLR DCLDGLEPLV EHFVDHASRQ IGCSLPRMTP AALKRLTQYH
WPGNVRQLEN VLFQAVSLCD GGKVQAEHIR LPDYGVRQGL SEVSLEGGLD AIVGRFERSV
LEQLYAHYPS SRQLGKRLGV SHTTIANKLR DYQISKEAKT D
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