| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1817 |
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| Symbol | |
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| ID | 1183458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1984523 |
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| End bp | 1985932 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393192 |
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| Product | aromatic amino acid permease |
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| Protein accession | NP_791641 |
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| Protein GI | 28869022 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA CAACTGCACC CTCGGGCGAA TTGAAACGCG GTCTGAAGAA TCGGCATATC
CAGCTGATCG CTCTGGGCGG CGCAATCGGC ACGGGCTTGT TTCTCGGGTC GGCGGGCGTG
CTGAAATCAG CCGGGCCTTC GATGATTCTC GGTTATGCGA TCTGTGGCTT CATCGCCTTC
ATGATCATGC GCCAGCTCGG CGAGATGATT GTCGAAGAGC CGGTGGCCGG GTCGTTCAGC
CATTTTGCGC ACAACTACTG GGGCGGTTTC GCCGGGTTTC TGTCGGGCTG GAACTGCTGG
CTGCTGTACA TCCTGGTGGG TATGTCGGAG CTGACCGCGG TCGGCAAATA CATTCACTAC
TGGTTGCCGC ACATCCCGAG TTGGGTGTCG GCAGCGGTGT TCTTCGTGTT GATCAACGCC
ATCAACCTGA CCAACGTCAA GGTGTTCGGC GAGACCGAGT TCTGGTTCGC GATCATCAAG
GTGGTGGCGA TCATCGGCAT GATCGCGCTG GGCAGCTACA TGCTGGTCAG CGGCAGCGGT
GGCCCGCAGG CGTCGGTCAG CAACCTCTGG GAGCATGGCG GATTCTTCCC CAATGGCGTC
AGCGGTTTGG TGATGGCGTT GGCGATCATC ATGTTCTCGT TCGGCGGCCT GGAAATGCTC
GGTTTTACCG CTGCCGAGGC CGAACAGCCG AAGACTGTGA TCCCCAAGGC GATCAATCAG
GTCATCTACC GCATCCTGAT TTTCTACATC GGCGCGCTGG TAGTGCTGTT GTCGCTGACG
CCGTGGGACA GCCTGCTGGC CAGCCTCAAT GCCTCGGGTG ATTCCTACAG CGGCAGCCCG
TTTGTGCAGG TATTCTCGAT GCTCGGCAGC GATGCGGCGG CGCATATCCT CAATTTCGTG
GTACTGACCG CAGCGCTGTC GGTCTACAAC AGCGGCACCT ATTGCAACAG CCGCATGCTG
GTGGGCATGG CCGAGCAGGG CGATGCGCCC AAGCTGCTGG CGCAGGTCGA TAAACGTGGC
GTGCCGGTCA AGGCGATTTT CGCGTCCGCC GCCGTGACGC TGGTGGCCGT GCTGCTCAAC
TACTTCGTGC CGCAACAGGC GCTGGAGTTG CTGATGTCAC TGGTGGTGGC CACGCTGGTC
ATCAACTGGG CAATGATCAG CTACTCGCAC CTGAAATTCC GCCAGCACAT GAATCGCACC
GGGCAGGTGC CGCTGTTCAA GGCGCTGTGG TATCCGTATG GCAACTACGT TTGCCTGGCG
TTTGTGGTGT TCATTCTCGG CATCATGCTG ATGATCCCCG GTATCCAGAT CTCGGTTTAC
GCGATACCGG TCTGGCTGGC GGTGATGTGG GTGTGTTACC GAGCCAAAAA CAGGCGTAGC
GTTGTCGTGA ATGCCGAGAC TGGCAAATAA
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| Protein sequence | MSETTAPSGE LKRGLKNRHI QLIALGGAIG TGLFLGSAGV LKSAGPSMIL GYAICGFIAF
MIMRQLGEMI VEEPVAGSFS HFAHNYWGGF AGFLSGWNCW LLYILVGMSE LTAVGKYIHY
WLPHIPSWVS AAVFFVLINA INLTNVKVFG ETEFWFAIIK VVAIIGMIAL GSYMLVSGSG
GPQASVSNLW EHGGFFPNGV SGLVMALAII MFSFGGLEML GFTAAEAEQP KTVIPKAINQ
VIYRILIFYI GALVVLLSLT PWDSLLASLN ASGDSYSGSP FVQVFSMLGS DAAAHILNFV
VLTAALSVYN SGTYCNSRML VGMAEQGDAP KLLAQVDKRG VPVKAIFASA AVTLVAVLLN
YFVPQQALEL LMSLVVATLV INWAMISYSH LKFRQHMNRT GQVPLFKALW YPYGNYVCLA
FVVFILGIML MIPGIQISVY AIPVWLAVMW VCYRAKNRRS VVVNAETGK
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