Gene PSPTO_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1728 
Symbol 
ID1183365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1895553 
End bp1896152 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content63% 
IMG OID637393100 
Producthypothetical protein 
Protein accessionNP_791553 
Protein GI28868934 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0343203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCG CCCGCTGTAA ACGATGCCTG CGCCCGACTG GGTATTGCCT CTGCGCCTTG 
ATCCCGCAGA TCGAAAGCCG CACGCGGGTG TTGATCCTGC AGCATCCTGA TGAAGTCAGT 
CATGCCTTGA ACACTGCGCG ACTGGCAGCG TTGGGGCTGG TCAATGCGCA GCTGTGCGTG 
GGTGAAGTGT TCGATGATCT GCACACGCTT CTGAACCCGC CCGGCTACCA GGCGCGGCTG 
CTGTTTCCAG GCGACGCGGC CGAGACGTTG ACGGCTTACG CGCCTGATGC CACGCCGATG 
CTGCTGGTCG TCCCGGATGG CACCTGGCGC AAGGCGCGCA AGCTGCTGCA CCTCAACCCG 
CTGTTGGCCG CGCTGCCGAG GGTGACACTC GGCAGCGTGC CCGCTTCGCG TTATCGGCTG 
CGCAAAGCGC CGGGCCCGGA GGCGTTATCG ACGCTGGAAG CCATCGTTCA TACCTTGCAG 
ACGCTGGAAG CGCCGAATGC TTTCGAGGCA CTGCTCAAGC CTTTCGATGC CCTGATCGAC 
GGCCAGATTC AAGCCATGGG CAACGACACG TATCAGCGCA ATCACGGCAA TCAACGGTAA
 
Protein sequence
MPRARCKRCL RPTGYCLCAL IPQIESRTRV LILQHPDEVS HALNTARLAA LGLVNAQLCV 
GEVFDDLHTL LNPPGYQARL LFPGDAAETL TAYAPDATPM LLVVPDGTWR KARKLLHLNP 
LLAALPRVTL GSVPASRYRL RKAPGPEALS TLEAIVHTLQ TLEAPNAFEA LLKPFDALID 
GQIQAMGNDT YQRNHGNQR