| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1557 |
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| Symbol | |
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| ID | 1183194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1719849 |
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| End bp | 1720745 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392929 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791382 |
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| Protein GI | 28868763 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCA ATCGTTGGGA AGGTCTGGAC GAGTTTGTCG CGGTCGCTGA ATGCGGGCAG
TTCACGGCCG CAGCGCTACG GCTGGGCGTT TCTTCGTCGC ACGTCAGCCG CCAGATCGTG
CGTCTTGAAG AACGCTTGCA GACTCGCCTG CTGTATCGCA GCACACGCAA GGTGGCACTG
ACCGAGGCGG GCCAGACGTT TCTGCATCAC TGTCAGCGCC TGCAGGACGG TCGCGAAGAA
GCCCTGCGCG CGGTCGGTGA TCTGGCCAGC GAGCCGAAAG GCCTGTTACG CATGACCTGC
GCAGTTGCAT ATGGCGAGCG CTTTATCACG CCCTTGGTGA CCCGCTTCAT GGAGCTGTAT
CCGCAGCTGC GCGTGGATAT CGAACTGAGC AATGACACGC TGGATCTGGT TCATGAGGGC
ATGGACCTGG CGATTCGTCT GGGCCGACTG CAGGATTCGC GTATGGTCGC GACGCGCCTT
GCGCCCCGGC AAATGTACCT GTGCGCATCG CCTTCCTATC TCGAACGCTA TGGACGACCG
CACAGCCTGT CGGAACTGAG CCGCCATAAT TGCCTGATCG GGGGCAGCGA TACCTGGCAG
TTGCAACAGA ACGGCCGCGA GTTTTCCCAA CGAGTACAAG GCAACTGGCG CTGCAACAGC
GGGCAGGCCG TGCTGGATGC CGCATTGCAA GGGGTCGGGC TGTGTCAACT GCCCGATTAT
TACGTGCAAA AGCACCTCAA AGAAGGAGCG TTGGTGTCAT TGCTGGAAGC GCATCAACCA
CCCAACACGG CCGTGTGGGC GCTTTACCCG CAACAACGTC ACCTGTCGCC CAAAGTGCGC
AAGCTGGTGG ATTATCTGAA AGAAGGGCTG GCGATGCAGG ATGAATATCG CCAGTAG
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| Protein sequence | MYTNRWEGLD EFVAVAECGQ FTAAALRLGV SSSHVSRQIV RLEERLQTRL LYRSTRKVAL
TEAGQTFLHH CQRLQDGREE ALRAVGDLAS EPKGLLRMTC AVAYGERFIT PLVTRFMELY
PQLRVDIELS NDTLDLVHEG MDLAIRLGRL QDSRMVATRL APRQMYLCAS PSYLERYGRP
HSLSELSRHN CLIGGSDTWQ LQQNGREFSQ RVQGNWRCNS GQAVLDAALQ GVGLCQLPDY
YVQKHLKEGA LVSLLEAHQP PNTAVWALYP QQRHLSPKVR KLVDYLKEGL AMQDEYRQ
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