Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1443 |
Symbol | |
ID | 1183080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1581671 |
End bp | 1582540 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392816 |
Product | carboxyphosphonoenolpyruvate phosphonomutase |
Protein accession | NP_791269 |
Protein GI | 28868650 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.522918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGG CTTCCCATCA AGATTTGCGC CGCAGTTTCC GTGCGCTTAC CTCGTCGAAC TCGTGCTTTC ACACGGCCTC GGTATTTGAC CCCATGTCAG CGCAAATCGC GGCAGATCTG GGCTTTGAAG TAGGCATCCT CGGCGGCTCT GTCGCTTCGC TGCAAGTACT GGCAGCCCCT GACTTCGCAC TGATCACGCT CAGCGAATTC GTCGAACAGG CCACGCGCAT CGGTCGCGTC GCGCAACTTC CGGTGATCGC GGACGCAGAC CATGGTTATG GCAATGCCCT TAACGTCATG CGTACCGTTG TGGAACTGGA GCGTGCCGGC ATTTCGGCAC TGACCATCGA AGACACCCTG CTGCCTGCGC AATTCGGGCG CAAATCCACA GACTTGATTT CCACGGCCGA AGGCGTTGGC AAGATCCGCG CAGCACTGGA AGCGCGCGTC GATCCAGAAA TGTCGATCTT TGCCCGCACC AATGCGGCAA TCATTCCGGT GCAGGAAGCC ATAAGCCGTG TGCAGCAGTA CCAGGCCGCT GGGGCTGATG GCATCACCAT CGTCGGCATT CGTGACTTTG ATCACCTGGC ACAGGTTTCA GAAGGCATAA CCGTGCCACT GATGCTGGTG ACCTACGGCA ATCCGGAGCT GCACGACAAC GCGCGCCTTG CCGAAATGGG AGTGAGGGTC TGCGTGCATG GCCATGCGGC GTACTTTGCC GCGATCAAGG CCACTTACGA CTGCCTGCGC GAGCAACGCC AGATACTGGG CAGCGAGTCG AACATGAGCG CGACAGAACT GACCCACACC TATACCCAGC CTGAAGACTA CGTCGAATGG GCCAAGAAGT TCATGAACGT GAACGAGTAA
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Protein sequence | MPKASHQDLR RSFRALTSSN SCFHTASVFD PMSAQIAADL GFEVGILGGS VASLQVLAAP DFALITLSEF VEQATRIGRV AQLPVIADAD HGYGNALNVM RTVVELERAG ISALTIEDTL LPAQFGRKST DLISTAEGVG KIRAALEARV DPEMSIFART NAAIIPVQEA ISRVQQYQAA GADGITIVGI RDFDHLAQVS EGITVPLMLV TYGNPELHDN ARLAEMGVRV CVHGHAAYFA AIKATYDCLR EQRQILGSES NMSATELTHT YTQPEDYVEW AKKFMNVNE
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