| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1396 |
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| Symbol | hrcQb |
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| ID | 1183032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1534888 |
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| End bp | 1535301 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392768 |
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| Product | type III secretion protein HrcQb |
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| Protein accession | NP_791223 |
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| Protein GI | 28868604 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACTG AAGATCTGTA TCAGGATGAT GTCGAAAGTC TCGAAGACTA TGACGATGAA
ACGGCTGAGC AGGAGCACGA GCACGAGCAC GAACAACAGT GGGCCGAGCC GGACGACGAG
TCCGAATATG CAGAGGCCGA ACCGGATGAC GACGAGCAAG AGGAGCAAGA AGAGCAACAA
GCACCCTCTG GCCTCGACTC TCTGGCTCTG GACCTGACGC TGCGTTGCGG TGAATTGCGC
TTGACGCTCG CCGAGTTGCG GCGGCTGGAC GCCGGGACCA TCCTCGAAGT GGGCGGCGTT
GCGCCAGGTT ATGCCACCTT GTGCCACGGC GAGCGCGTGG TGGCTGAAGG CGAACTGGTT
GATGTCGATG GCCGGCTTGG CTTGCAGATT ACCCGGCTGG CGGCCCAGCC ATGA
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| Protein sequence | MSTEDLYQDD VESLEDYDDE TAEQEHEHEH EQQWAEPDDE SEYAEAEPDD DEQEEQEEQQ
APSGLDSLAL DLTLRCGELR LTLAELRRLD AGTILEVGGV APGYATLCHG ERVVAEGELV
DVDGRLGLQI TRLAAQP
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