Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1269 |
Symbol | |
ID | 1182905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1392581 |
End bp | 1393006 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392644 |
Product | hypothetical protein |
Protein accession | NP_791099 |
Protein GI | 28868480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACTT CAAAAAAAGC TGAATCCGCG CATTTGCTGG ACGATCTGGA ATCGATCCGC CAACTGCTCG GCGATGACTC CGCACAACCT CCGTTACTGA CCGACACCGT CCACCGCGAG GGCCAGATCC CCCTGCTGTT CGATGTGGTT GGTAGCCGGC CTGACTCGGT ACACCCGGAA AACTTGGACG AAGACGATAT CCCGACGTTG ACGGCTGATG CGCCGGTGGA GCAGTTGCAA CAGGTTCAGC AGGCTCAAGC GCTGCCCAAC CCCGATGCGT TGCTGCACCT GGACACCGAA CTGCGTGCCG CCGCGCAACT GATCATGCAA GACGTGATTG ATGACTTTGC ACCGCATATC GAGACTGAAA TCAAGCGACG GCTGGAGGCC AGGCTGGAGC GGCTGTTGGC GCAGCAGCAG AAGTGA
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Protein sequence | MDTSKKAESA HLLDDLESIR QLLGDDSAQP PLLTDTVHRE GQIPLLFDVV GSRPDSVHPE NLDEDDIPTL TADAPVEQLQ QVQQAQALPN PDALLHLDTE LRAAAQLIMQ DVIDDFAPHI ETEIKRRLEA RLERLLAQQQ K
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