Gene PSPTO_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1262 
Symbol 
ID1182898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1384359 
End bp1384676 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content61% 
IMG OID637392637 
Productendo/excinuclease domain protein 
Protein accessionNP_791092 
Protein GI28868473 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.505421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGAGG CTCTGGAAAC TTCGCTCGGC AAGCCCTGGT TTGTGTACCT GGTGCGCGCG 
GCCAATGGCG CGTTGTACTG CGGCATCAGC GACAACCCGC AACGGCGCTT TGCCGCGCAC
CAGAGCGGCA AGGGCGCACG TTTTTTCTGC TCCAGCCCGG CGCTGGCACT GGTCTACGTC
GAGCAATGGC CCAGCAAGGG CGATGCGTTG CGTCACGAGC GGCTGATCAA GAAACTCAGA
AAAAGCGCCA AAGAGGCACT GGCGGCCAGC TACCTGAACG TACCGATCCA TGAGGGTGAT
GTCGCCTCAT CAGTTTGA
 
Protein sequence
MPEALETSLG KPWFVYLVRA ANGALYCGIS DNPQRRFAAH QSGKGARFFC SSPALALVYV 
EQWPSKGDAL RHERLIKKLR KSAKEALAAS YLNVPIHEGD VASSV