Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1262 |
Symbol | |
ID | 1182898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1384359 |
End bp | 1384676 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392637 |
Product | endo/excinuclease domain protein |
Protein accession | NP_791092 |
Protein GI | 28868473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.505421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTGAGG CTCTGGAAAC TTCGCTCGGC AAGCCCTGGT TTGTGTACCT GGTGCGCGCG GCCAATGGCG CGTTGTACTG CGGCATCAGC GACAACCCGC AACGGCGCTT TGCCGCGCAC CAGAGCGGCA AGGGCGCACG TTTTTTCTGC TCCAGCCCGG CGCTGGCACT GGTCTACGTC GAGCAATGGC CCAGCAAGGG CGATGCGTTG CGTCACGAGC GGCTGATCAA GAAACTCAGA AAAAGCGCCA AAGAGGCACT GGCGGCCAGC TACCTGAACG TACCGATCCA TGAGGGTGAT GTCGCCTCAT CAGTTTGA
|
Protein sequence | MPEALETSLG KPWFVYLVRA ANGALYCGIS DNPQRRFAAH QSGKGARFFC SSPALALVYV EQWPSKGDAL RHERLIKKLR KSAKEALAAS YLNVPIHEGD VASSV
|
| |