| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1238 |
|---|
| Symbol | algG |
|---|
| ID | 1182874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1358879 |
|---|
| End bp | 1360489 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637392613 |
|---|
| Product | alginate biosynthesis protein AlgG |
|---|
| Protein accession | NP_791068 |
|---|
| Protein GI | 28868449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC ATGCAAGCAA CGGGCGTAGC CGCAACTGGC CGCACGCTCT GCTCGAAAGT
GCCCTGCTGA CCAGCGCTCT GCTGATGGCC AGCAGCGTCG CGCTGGCCAA CGCGCCTGCC
GTACCCGAAG CACCGAAGGC ACTGGTTAAA GAGTTGCACC AGGCCAAGAC CTACACCATC
ACCAGCCCGC CGACCGGGCC GCTGGAAATG GCCAAGCCGG TGCTCCCCGA CCTGAGCGGT
TACACCACCG AGGCGGCGCT GAAAAAGATT GCGCGTAACA AGCCCGGCAA GATCACCGTC
GCGCGGATGA TGGAAGAAAC CGGCCTGAAG GAATTCATCG GCGGTGACAA CAAGATGGCT
GAATGGGTGG TCCGTCAGAA GGGCATTCCG CAGGCAATCA TGATTTCCGA CGGCTACGTG
AACCTGCAGG ATCTGGTGAA AAAGGTTCCC AAGCAGTTTC TGAGTGAAGT GTCGCCCGGT
GTCTACGTGG CGCGCCTGCC GATCCTGGTC AAGGAGACCG GGATCTTCGA GATCGACAGC
AAGACCAAGG AATTGCGTCT GTCTCAGGAA AAGGGCTCGT TCATCGTCAG CGAAGGCAAG
ATGCTGATCA CCAACACCTC GGTCAACGCC TGGAGTGAAA CCCGCAACGG TCTGGCGGCC
TACCGCACCC CCGACGAGTT TCGCCCGTTC GTACTGACCT GGGGCGGTTC GCAAACGTGG
ATCGCCAAGA CCAAAATGGC GAGCATGGGT TACAACCAGA GCAAGTCCTA CGGCGTCAGT
ATTTCCCAGT ACACGCCCAA CACCGCGAAG GTTCTCAAGC GTGGCGAGCC GACCGGCTGG
ATCATCGACT CCGAATTCGC GGACATGTGG TACGGCTTTT ACTGCTACGA AACACGTGAC
TTCGTGGTCA AGGGCAATAC CTACCGCGAC AACATCGTGT ACGGCATCGA CCCGCATGAC
CGCTCCCACG GCCTGATCAT CGCCGAAAAC GACGTTTACG GAACCAAGAA AAAGCACGGG
ATCATTATTT CCCGGGAAGT GGACAACAGC TTCATCTTCC GCAACAAAAG CCACAACAAC
AAATTGTCCG GCGTGGTTCT GGACCGTAAC AGCGTCGGCA ACATCGTCGC CTACAACGAG
ATCTATCAGA ACCACACCGA CGGCATCACT CTTTACGAAA GCGGCAACAA CCTGCTGTGG
GGCAACCGTG TGATTGCCAA CCGCCGTCAC GGTATCCGCG TGCGCAACAG TGTGAACATC
AAACTGTACG AGAACGTGGC CATGGCCAAC GGACTGATGG GCGTCTACGG CCACATCAAG
GACTTGAACG ATACCGACCG CGACATCGAG CTCGACCCGT TCGACGCTCA GGTGTCGCTG
ATCATGGTCG GTGGCGAACT GTCCAGCAAT GGCTCCGGTC CGCTGTCCAT CGACTCGCCA
TTGAGCGTCG AGCTGTATCG CGTCTCGATG CTGATGCCCA CCAAAGAGGT CGGTATCAGC
CTCAACGGTA TCCTCGGTGA GCGTCAGGAC GAAATTCTCG ACCTGCTGGT TCGCCAGAAA
AAAGCCGTAT TGATCGACCC CGTCGAAAGC CAGACCGAGC TGCGGGAATG A
|
|---|
| Protein sequence | MNSHASNGRS RNWPHALLES ALLTSALLMA SSVALANAPA VPEAPKALVK ELHQAKTYTI
TSPPTGPLEM AKPVLPDLSG YTTEAALKKI ARNKPGKITV ARMMEETGLK EFIGGDNKMA
EWVVRQKGIP QAIMISDGYV NLQDLVKKVP KQFLSEVSPG VYVARLPILV KETGIFEIDS
KTKELRLSQE KGSFIVSEGK MLITNTSVNA WSETRNGLAA YRTPDEFRPF VLTWGGSQTW
IAKTKMASMG YNQSKSYGVS ISQYTPNTAK VLKRGEPTGW IIDSEFADMW YGFYCYETRD
FVVKGNTYRD NIVYGIDPHD RSHGLIIAEN DVYGTKKKHG IIISREVDNS FIFRNKSHNN
KLSGVVLDRN SVGNIVAYNE IYQNHTDGIT LYESGNNLLW GNRVIANRRH GIRVRNSVNI
KLYENVAMAN GLMGVYGHIK DLNDTDRDIE LDPFDAQVSL IMVGGELSSN GSGPLSIDSP
LSVELYRVSM LMPTKEVGIS LNGILGERQD EILDLLVRQK KAVLIDPVES QTELRE
|
|---|
| |