| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1194 |
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| Symbol | nfrB |
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| ID | 1182830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1307737 |
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| End bp | 1309857 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392571 |
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| Product | bacteriophage N4 adsorption protein B |
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| Protein accession | NP_791026 |
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| Protein GI | 28868407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0726251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCGC TCTATTGGCC TTACTGGCTG GCCCATTACT ATAGCATGCT GGAAGTCGCG
ACGATCATTG TCGGGCTGAT CATTCTGGTA TCGAGCATCG ATGACCTGTT CATCGACCTC
TGGTACTGGG CCAGACGGCT GTACCGCAAG TTCACCGCCG AGCGCCGCTA CCGGCCGCTT
ACCGCCGAGC AGTTGATTGC CCGCGACGAG CAGCCGCTGG CGATCATGGT TCCGGCGTGG
CTGGAATACG ACGTCATCGC GCCGATGATC GAAAACATGG TGTCAACGCT CGACTACCAG
AACTACGTGG TTTTTGTCGG CACTTACATC AACGACCAGC GCACCATCGA TGAAGTGGAG
CGCATGCGCC GCCGCTACAA GCAGTTGCAC CGCGTGGAGG TGCCGCACAA TGGCCCGACC
TGCAAGGCCG ACTGTCTGAA CTGGGTGATC CAGGCGATTT TCCTGTACGA GCAGACCCAT
GCCGTGCAGT TCGCCGGAAC CATCCTGCAC GACAGCGAAG ACGTGCTGCA CCCGCTTGAG
CTGCGTCTGT TCAACTACCT GTTGCCGCGC AAGGACATGA TCCAGTTGCC AGTCGTGTCG
CTGGAGCGCA ACTGGTACGA ATGGGTGGCC GGGACCTACA TGGATGAGTT CGCCGAATGG
CATGGCAAGG ACCTGGTGGT TCGCGAAAGC ATGACCGACA CCGTGCCCTC GGCCGGCGTC
GGCACGTGTT TCTCGCGGCG TGCCTTGATG GTGCTGGCCG ATGAAAACCA GAACCAGCCG
TTCAACACCG AAAGCCTGAC CGAAGACTAT GATGTGGGTG CGCGGTTGGC GAAGTACGGC
ATGCAGGCGA TCTTTGTGCG TTTTCCGGTG CAGTTCCGGG TGCTGCGCAA ATCGTGGTTC
CGCAAGCCAT ACGAGTCGAC GCTGGAGATG CCACTGTGTG TCCGGGAATT TTTCCCGGAC
ACCTTCCGCA CCGCTTTTCG CCAGAAGGCC CGCTGGACAC TGGGCATCGG CCTGCAAGGC
TGGGAGCAAA TGGGCTGGAC CGGTTCGCTG GCGAACCGTT ACCTGCTGTT TCGCGACCGT
AAAGGCGTGG TGACCTCGTT TGTCAGCATC ATTGCTTACC TGATTCTCGT GCAGTTGCTG
GCGTTGATCG TCCTGCGTTC CAGCGGGCTG TGGAACACCA GCTTCCCGAC ACCGTTTGAA
ACCAACGGCC TCATTCAGTA CCTGCTGGTG GCCAACGGCG TCGCATTGCT GTGGCGGATT
TTGCACCGCT GCTACTTCAC TACGGTTCTG TATGGCTGGC AGCATGGCTT GCTGTCCATA
CCGCGCATGG TGGTCGGCAA CTTCGTCAAC TTCATGGCTG CGGCGCGCGC CTGGCGGATG
TTTCTGGTCG GCAAGGTGCT CAATCGCAAA CTGGTCTGGG ACAAGACCAT GCACGACTTC
CCGTCCACCG ACCTGGTTGC CGCCGCGCCG CGACGTCTGG GCAGCGTGCT GATCTCGTGG
CAGGCCATCA ACGACGAGAA ACTTCAGACC GCACTGGCCG AGCAACAGAC TCGCCAAGTG
CCGCTGGGCC GGATTCTACT CAGCCACGGC TGGCTCGACG ATGAAACCCT GGCGGAGGCC
ATTGCGTTCC AGAACGATCT GCCACGGGTG TTCGACATTG CTGGCAAACG TAGCACGAGC
AATCCGCTGG CGGATGAGTT CTGCCTGCGC TGGCGTGTCG TGCCGCTGCA AATGAATGCA
ATGGGTCGCC AGGAAATAGC GGTCGCCAGC CCGCTCCCGG AAGAAGGCCT GCAACAGATT
ACCGAACAGT TGGGCGCCGA GCCGGTGCAG CTGATTGCGC GTGAAAGCGA CATCGTCACG
CAGTTGCGCC AGCTTCAGGT GGTCGAAGGT CAGCCGTTGC CGTCCGCTAC GCCGCTGTTG
GGCGACCTGC TGATCGAGCA AGGGCTGCTG GACCGCGAAG TGTTCCGTAA AGCCATGCTT
GGTTATCGCC CGCATGTGCA CGGCCGGATC GGCGACTACC TGGTCGACAT CGGCGTGCTG
CCCAGAGAAA CCATCGAACA GGCTGTGGCA CGTCAGCACA ACCACTACCA CGCTGACGAT
CAAACGGAGC AGCCACTATG A
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| Protein sequence | MTSLYWPYWL AHYYSMLEVA TIIVGLIILV SSIDDLFIDL WYWARRLYRK FTAERRYRPL
TAEQLIARDE QPLAIMVPAW LEYDVIAPMI ENMVSTLDYQ NYVVFVGTYI NDQRTIDEVE
RMRRRYKQLH RVEVPHNGPT CKADCLNWVI QAIFLYEQTH AVQFAGTILH DSEDVLHPLE
LRLFNYLLPR KDMIQLPVVS LERNWYEWVA GTYMDEFAEW HGKDLVVRES MTDTVPSAGV
GTCFSRRALM VLADENQNQP FNTESLTEDY DVGARLAKYG MQAIFVRFPV QFRVLRKSWF
RKPYESTLEM PLCVREFFPD TFRTAFRQKA RWTLGIGLQG WEQMGWTGSL ANRYLLFRDR
KGVVTSFVSI IAYLILVQLL ALIVLRSSGL WNTSFPTPFE TNGLIQYLLV ANGVALLWRI
LHRCYFTTVL YGWQHGLLSI PRMVVGNFVN FMAAARAWRM FLVGKVLNRK LVWDKTMHDF
PSTDLVAAAP RRLGSVLISW QAINDEKLQT ALAEQQTRQV PLGRILLSHG WLDDETLAEA
IAFQNDLPRV FDIAGKRSTS NPLADEFCLR WRVVPLQMNA MGRQEIAVAS PLPEEGLQQI
TEQLGAEPVQ LIARESDIVT QLRQLQVVEG QPLPSATPLL GDLLIEQGLL DREVFRKAML
GYRPHVHGRI GDYLVDIGVL PRETIEQAVA RQHNHYHADD QTEQPL
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