| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1154 |
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| Symbol | |
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| ID | 1182790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1268283 |
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| End bp | 1269062 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392533 |
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| Product | hydrolase, alpha/beta fold family |
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| Protein accession | NP_790988 |
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| Protein GI | 28868369 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR03611] pyrimidine utilization protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCATG AAATCCATCG TTGTCAGCTT GCCGATGCGC CGCTGTTGGT GCTCAGCTCC
GGGTTGGGCG GGTCCAGCCG TTACTGGGCC GATGACCTGG CGGCGCTGAC CCGCGACCAT
GACGTGCTGG TTTACGATCA CGCCGGGACC GGGCGCAGCC CTGCCGCCCT GCCGTCGGAT
TACTCGATCC GGCACATGGC TGTCGAATTG CTGGCCCTGC TCGACTCGCT CGGCATCCAG
CGTTGCCACT TCATGGGGCA TGCGCTGGGC GGGCTGATCG GGCTGGAACT GGCGCTGTTA
CGCCCTCAAT TGCTGCAAAG CCAGGTGCTG ATCAACGTCT GGAGCAGTCC GAACCCGCAC
AGCGCGCGCT GTTTTTCGGT ACGCAAGCAA CTGCTGTTGA ACAGCGGGCC GCAGGCTTAT
GTTCAGGCGC AGGCGTTGTT TCTGTACCCG GCTGACTGGA TCGCTGCCAA CAGTGCGCGG
CTGGCCGACG ATGAAGCCCA CGCGCTGGCG CATTTTCCTG ACACCGAAAA CCTCCTGCGG
CGCATCCATG CACTGGAAAC ATTCAACATC GAAGCACAGC TTGCGCGCAT TCAGACCCCG
ACCCTGCTGA TTGCCAACCG CGATGACATG CTCGTGCCGT GGCAACAATC CCGGCACCTG
GCAAAAGTGC TGCCGAATGC CAGACTGGTC TTGCTGGAAT ACGGCGGCCA CGCCTCCAGC
ATCAGCGACC CCCTGCCGTT CCAGCGAGCC TTGCTCGATT TTCTCAGCGC ACAAACCTGA
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| Protein sequence | MFHEIHRCQL ADAPLLVLSS GLGGSSRYWA DDLAALTRDH DVLVYDHAGT GRSPAALPSD
YSIRHMAVEL LALLDSLGIQ RCHFMGHALG GLIGLELALL RPQLLQSQVL INVWSSPNPH
SARCFSVRKQ LLLNSGPQAY VQAQALFLYP ADWIAANSAR LADDEAHALA HFPDTENLLR
RIHALETFNI EAQLARIQTP TLLIANRDDM LVPWQQSRHL AKVLPNARLV LLEYGGHASS
ISDPLPFQRA LLDFLSAQT
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