Gene PSPTO_1057 details

Gene Information

• Locus tag: PSPTO_1057
• ID: 1182691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1153738
• End bp: 1154148
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637392436
• Product: hypothetical protein
• Protein accession: NP_790893
• Protein GI: 28868274
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGTCG TATTGGATAC CAACATCCTG TTCAGCGCCC TGATCTCGCC ACATGGTGCA 
CCCGACACCT TTTATCGTGC CTGGCGCACC GCCCGCTTCG AGATAGTGAC CTCACAGATG 
CAGCTGGATG AAATTCGTCG GGCCAGCCGC TACCCCAAGT TGCAGGCTAT CCTGCAGCCC 
TCCAAAGTTG GCACCATGAT CAATAACCTG CAGCGAGCTC TAGTGCTAGA GCGCCTGACA 
ATTGAAGAAG AGGCCGATGA TCCAAATGAT TCATTTTTGC TGGCTATGGC GCTTGCAGGC 
GATGCGGACT ATTTAGTCAC TGGCGATCGC CGCGCCGGCC TTTTGCAGCG CGGCCACATT 
GGGCGTACGC GAATCGTGAC GTCTGCACTC TTCTGCGCTG AAGCACTTTA A 

 

Protein sequence

MRVVLDTNIL FSALISPHGA PDTFYRAWRT ARFEIVTSQM QLDEIRRASR YPKLQAILQP 
SKVGTMINNL QRALVLERLT IEEEADDPND SFLLAMALAG DADYLVTGDR RAGLLQRGHI 
GRTRIVTSAL FCAEAL