Gene PSPTO_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0989 
Symbol 
ID1182623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1080457 
End bp1081164 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID637392371 
Producthypothetical protein 
Protein accessionNP_790828 
Protein GI28868209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG ACCTATCCGA AATGTCACAG CTCGCGCCGA TCTTTCGCGA GCTGTTCAAG 
GGCTATCACA TCAGCCGCCG CGACCCGGAG CTGTACGCCC AGTTGTCCAA TTGCCAGGAT 
CAATACCGCA CGCTGTTCAA GGCACTGGGC TACGAGCTGG TCTGCGACAC TCGCGGCTTC 
TATTACTTCG TGCCGGAACT GGCTGCAGCC CAGGTCAACA AGACCGCTCA GCGCCTGGCG 
CTGTTCACCT TCATCCTCGT CGAGCACCTG GCTGATCAGG GCCGCGACCC GATGGCCGTG 
CTGGACGGCG GCAGCCTGGG CCGCGACGAG CTGCCTTCGA TGCTGGAAAA ATACCGCGAC 
CTGTTTCTCC AGGCCGAGGT GCAGACCCAG GAAGAGCTGG AAGAGAAGAT CATGCGCCGC 
ATGACGCAAC TGGGCTTTGC CAGCGAAGAA GTCGGCATCT ACCGTTTCCT GCCGCCCATG 
CACCGTTTTC TCGACGTCTG CCTGTCGGTG CAACAGGACC GCGACCTGGC AGCCAGCCTG 
CACAGCGCGC TGCCACTGCC GACGCCGGTG CTCATTGATG ACGACAGCGA CGAGAAGCTG 
CTGGAAACCG ATGACCCGCT GGACCTGGCT GAGTTCGGTG AAGAAACCGA AGAAGACGCA 
CTGGCCCGGG CAATCGCCGA TGAGCAAAGA CAGGAGATGG ACACATGA
 
Protein sequence
MHLDLSEMSQ LAPIFRELFK GYHISRRDPE LYAQLSNCQD QYRTLFKALG YELVCDTRGF 
YYFVPELAAA QVNKTAQRLA LFTFILVEHL ADQGRDPMAV LDGGSLGRDE LPSMLEKYRD 
LFLQAEVQTQ EELEEKIMRR MTQLGFASEE VGIYRFLPPM HRFLDVCLSV QQDRDLAASL 
HSALPLPTPV LIDDDSDEKL LETDDPLDLA EFGEETEEDA LARAIADEQR QEMDT