| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0890 |
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| Symbol | scrY |
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| ID | 1182519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 967317 |
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| End bp | 968939 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392266 |
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| Product | sucrose porin precursor |
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| Protein accession | NP_790729 |
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| Protein GI | 28868110 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCAACG TCACCAAAAC AATAAAAACA AAACAGGAAG TCCACATGCA GAACGCATCA
AGATGGGTAC TCGCAGGCGT GCTCGGCACC TCGACGGCGG TTTCTCAGGC AGCGACTCTG
GAAGAACGGA TGGCTGCATT TGAAGCCCGT GCCAGTGCTG CTGAAAGGCG TGCAGCCGCA
GCCGAACAGC AAACCCAGGC GCTCGCCAGG GAGTTGCAGC AAATCAAACT GGCCAACCCT
GCTTTGCAGC CTGCGGCGCC TGCTGTGGCA CCCACTGTGG CGGCCAGCCC GGCGCCTGCC
CTGGATGAGC GCGTGGCAAA ACTCGAAGCC CGCCAATTGA GCATGGAGAA GCCAAGCGGT
GCCGGGCATC TCACCGACGG CTTCAGCTTT AAGGGCTATG CCCGTTCCGG CTTGTTGATC
AATGACGGTT TGGGTGGCGG CCGCGGCGGG CCTTATACGA CCCCGGCGGG TTCAGTCGGC
GGTGCGGTCG GGCGACTGGG TAACGAAGAC GACACCTACA TGCGCTTCGA CCTGTCGAAA
GAAATCTATG CGCAGAACGG CACGCGTTCC AAATTCACGG TTTCCATCGC CGATGGAGTG
GAAAGCTACA ACGACTGGAC GGCCACTGAG AGCAACCTGA ATGTGCGGCA GGTATTCACC
GAGCTCGACC ATATCGCCGC GTTCAAAGGC AACCCGGTAT TCGAGAACGC TACCCTGTGG
GCTGGCAAGC GATTCGACAG GGATAATTTC GATATTCACT GGCTGGACTC GGATGTGGTC
TTTCTGGCCG GGACCGGCGG CGGTATCTAC GATGTTCAGA TGAACAAGGG CTGGCGCTCG
AACTATTCCC TGATCGGGCG TAACTACGGA GACTTCAGTG AGGGCGGCGT CGATGCTGAT
GTAGAGAGCT ACATCCTGAC CTCCAACCAA TTCTTCGACA GTGGCCAGTG GCAGTGGATG
TTCAATGCCA TTGGGGCGAA GAAAAACGAC GTTGGCACTC GCACCAATCA GGCCGGTTCG
ACGCCCGCAG ATTCCGGCTT GCACTCCATG TTGGCCAATC ACCAGAAAGA CTTTTTCGGC
CGTGAAGGCT TCTTCAAGAC CGCTTTGCTC TATGGGCAAG GTCTGGGGGC GCAGGTCAAG
GACATCGGCT CGGACGGTGA ACTGCTCGAC GACGCTCGCG CGGTGCGTCT GGCGCTATAT
GGCGAAACCC CTGTTGCGCC GGGATGGCGC ATCGGCCCCA GCCTGCTGGC CGAGCAGAGC
AAAGACCGAT ATGTCAAAGG CGACGATTAT CGCTGGCTCA CGCTGAACAT GCGCCTGGCC
AACGAGATCA ACAGTAACTT CGAGATGGCC TACGAGCTGA GCTGGCAAAC CATGGACCTG
GACCCCAAAG GCTACCTGCA ACGCAACGCA GTCGATGGCA ACTTCTGGAA GTTTACGGTT
GCGCCGACGT TCAAGCCAGA CATGGGCGAC TTGCTCACGC GTCCCGAATT GCGCGTGTTC
GCAAGCCTCA TGAACTGGTC TTCGGACCTG GACCGCTACA GCACGACCGG CAATTTCGGC
AAAAGCGACT TCAGCGCCGG TGGCGTATGG CAATTCGGAA TCCAGATGGA AACCTGGTTC
TAG
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| Protein sequence | MANVTKTIKT KQEVHMQNAS RWVLAGVLGT STAVSQAATL EERMAAFEAR ASAAERRAAA
AEQQTQALAR ELQQIKLANP ALQPAAPAVA PTVAASPAPA LDERVAKLEA RQLSMEKPSG
AGHLTDGFSF KGYARSGLLI NDGLGGGRGG PYTTPAGSVG GAVGRLGNED DTYMRFDLSK
EIYAQNGTRS KFTVSIADGV ESYNDWTATE SNLNVRQVFT ELDHIAAFKG NPVFENATLW
AGKRFDRDNF DIHWLDSDVV FLAGTGGGIY DVQMNKGWRS NYSLIGRNYG DFSEGGVDAD
VESYILTSNQ FFDSGQWQWM FNAIGAKKND VGTRTNQAGS TPADSGLHSM LANHQKDFFG
REGFFKTALL YGQGLGAQVK DIGSDGELLD DARAVRLALY GETPVAPGWR IGPSLLAEQS
KDRYVKGDDY RWLTLNMRLA NEINSNFEMA YELSWQTMDL DPKGYLQRNA VDGNFWKFTV
APTFKPDMGD LLTRPELRVF ASLMNWSSDL DRYSTTGNFG KSDFSAGGVW QFGIQMETWF
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