Gene PSPTO_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0881 
Symbol 
ID1182510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp952643 
End bp953524 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content58% 
IMG OID637392257 
Producthypothetical protein 
Protein accessionNP_790720 
Protein GI28868101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGGGA GGAAAATTCC GCTCAGGTAC GCCAACGATC CTCGACCGAT CTTTGACTGG 
ATGCAGGTGG TCCGCAAAAA GGCCGTGGTC TATATCGGCC TGGACGCCTT GTCGGACACG
GAGGTCGCCG CTGCCGTCGG CAACTCGATG TTCTCCGACC TGGTCTCGGT CGCTGGCCAT
ATCTACAAGT TCGGCGTCGA CGACGGGTTA CCGGGTAGCG TCCCTGGCAC CAAAGTGCCT
ATCAACCTCC ACGCCGATGA GTTCAACGAG CTGATGGGTG AGGAATTCAT TCCGATGATC
AACAAGGGTG GCGGTGCCGG CATGCAGGTG ACTGCCTACA CCCAGACCAT GAGCGATATC
GAGGCGAAGA TCGGTAACAA AGCGAAGGCT GGCCAGGTGA TCGGTAACTT CAACAACGTG
TTCATGCTGC GCGTCCGTGA AACATCCACC GCCGAGCTGC TCACAAACCA GTTACCTAAG
GTTCAGGTTT TCACGTCCAC ACCGGCCAGC TCGGCTAATG ACAGTGCAAC GGGCAACACC
GCGTTCACGT CCTCCAGTCA TGACCAGGTG CAGCAGGTCA GCGTGCCCAT GATTGAGCCC
GCGCATGTCG TGGGCCTGCC CAAGGGCCAA TGCTTTGCGC TCATGGAAGG CGGCAATCTG
TGGAAAATCA GAATGCCTTT GCCTGGACAT GATCCTGATG AGGTGATGCC GGCAGATCTG
CAGGCCCTGG CGGAAAGCAT GCGTCAGACC TATCAGGTGG GCAAGGTCGA CGACACGGGT
TGGTGGTCCG CGCCTGGTTA TCAGACGCTC AACGAGTCCC TGCCTGCAGA TCTGCTCGAC
GACTTCAAAA AAATCGCTGT TGCACCTGAG GATGCGGCAT GA
 
Protein sequence
MHGRKIPLRY ANDPRPIFDW MQVVRKKAVV YIGLDALSDT EVAAAVGNSM FSDLVSVAGH 
IYKFGVDDGL PGSVPGTKVP INLHADEFNE LMGEEFIPMI NKGGGAGMQV TAYTQTMSDI
EAKIGNKAKA GQVIGNFNNV FMLRVRETST AELLTNQLPK VQVFTSTPAS SANDSATGNT
AFTSSSHDQV QQVSVPMIEP AHVVGLPKGQ CFALMEGGNL WKIRMPLPGH DPDEVMPADL
QALAESMRQT YQVGKVDDTG WWSAPGYQTL NESLPADLLD DFKKIAVAPE DAA