Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0740 |
Symbol | smtA |
ID | 1182360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 787469 |
End bp | 788134 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392115 |
Product | smtA protein |
Protein accession | NP_790587 |
Protein GI | 28867968 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.867796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCAGG CCGATCTGAC CGAGACGCTG CCCAAGCGGC CGTTGCGTGT GCTGGATATC GGCGCGGGGT TGGGGCATAT GTCGCTGTGG CTGGCCGAGC AAGGTCATGA GGTGACGCTG GCCGAGCCCG CCGAGCCCAT GCTTGAAGGC GCACGTCAGC GTTTTGCCGA CGCCGGACAG ACGGCAACCT TCATTCAGGC CCCGTGGCAG ACGCTGCCCG ACTTACTGAG CGACACTTAC GATGTGGTGC TGTGCCACGC CGTGCTGGAA TGGCTGGCCG AGCCGTACTC GATTCTTCCG GTGCTGCGCA GGCTCACCCA GGACGATGGC TGGCTGTCGC TGGCGTTTTA CAACCGCGAT GCGCTGATTT ATCGCAACTT GCTCAAGGGC CATTTCCGCA AGATGCGTAA AAACGACATG GCCGGAGAAA AGCAGAGCCT GACGCCCCAG CAACCGCTCG ACCCTCGGGA ACTCGCGACG CAACTTGAAG GGCTGTGGCA AGTCGAAACC CGTAGCGGCG TGCGGGTGTT TCACGATTAC ATGCCGCTTG AATTCCAGGC CCGGGCCGAG CTGACGGAAC TGCTGGAAAT GGAGCTGGCG CATCGACGTC ATCCGGCGTT TGCCGGGCTG GGTCGATACC TGCACTGGAT GTGCCGTCCG GTCTGA
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Protein sequence | MLQADLTETL PKRPLRVLDI GAGLGHMSLW LAEQGHEVTL AEPAEPMLEG ARQRFADAGQ TATFIQAPWQ TLPDLLSDTY DVVLCHAVLE WLAEPYSILP VLRRLTQDDG WLSLAFYNRD ALIYRNLLKG HFRKMRKNDM AGEKQSLTPQ QPLDPRELAT QLEGLWQVET RSGVRVFHDY MPLEFQARAE LTELLEMELA HRRHPAFAGL GRYLHWMCRP V
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