| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0681 |
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| Symbol | |
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| ID | 1182301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 737352 |
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| End bp | 738617 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392056 |
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| Product | permease, putative |
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| Protein accession | NP_790528 |
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| Protein GI | 28867909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCTGT TTCGTCTGGC GCTCGCCAGC CTGGCCAACC GCCGCTTTAC TGCGTTTCTC
ACTGCCTTCG CCATCGCCCT TTCAGTCTGC CTGTTACTGG CCGTGGAGCG GGTGCGCACC
GAAGCCCGCG CCAGCTTCGC CAGCACCATC AGCGGCACCG ACCTGATCGT CGGCGCGCGC
TCCGGTTCGC TCAATCTGTT GCTGTATTCG GTGTTCCGCA TCGGTAACGC CACCAACAAC
ATTCGCTGGG ACAGCTTCGA GCACTTTGCC CAAAGCCAAC AGGTCAAATG GGCGATACCG
GTTTCGTTGG GCGACTCGCA CCGTGGCTAC CGGGTGATGG GCACCAACGA GTCGTACTTC
GAGCATTATC AGTTTGGCCG CCAGCAGCAC CTGCAAATGG CTGAAGGCCG TGAGTTTCAG
ACCGATCCTT TTGAGGTTGT CCTTGGCTCG GAAGTCGCCA GAGCGCTGCA TTACAAGCTC
GGCGACAAAC TGGTACTGGC GCACGGCGTT GCGGCGATCA GCCTGGTCAA GCACGACGAC
AAGCCGTTTA CCGTGGTGGG CATCCTCAAG CCTACCGCCA CGCCGGTGGA TCGCACACTG
CACATCAGCC TGGGCGGCAT GGAAGCCATC CATATCGATT GGCACAACGG CGCGCCGGCC
CGGGGCAACG AACGCATTTC AGCCGATCAG GCGCGCAACA TGGACCTGAC GCCCACCGCG
ATTACCGCGT TCATGCTGGG CCTGAACAGC AAGATTTCAA CGTTCAGCCT GCAACGCGAG
ATCAACGAGT ACCGCGGCGA GCCGATGCTG GCGATTCTGC CGGGCGTGGC CTTGCAGGAA
CTGTGGAGCC TGATGGGCAC CGCTGAAAAG GCGCTGTTCG TGATTTCGCT GTTCGTGGTG
CTGACCGGGC TGATCGGCAT GCTGACCGCG ATCCTCACCA GCCTTAACGA ACGACGTCGG
GAAATGGCCA TCCTGCGCTC GGTCGGCGCG CGGCCCTGGC ATATCGCAAG CCTGCTTATA
CTGGAGGCCT TCGCCCTGGC ACTGGCCGGG GTGGTCAGTG GCCTTGCGCT GCTCTATATC
GGCATTTTCG CGGCCCACGA CTACGTGCTC GAGAACTACG GCTTATACCT GTCGTCTATG
CCACCTGGCC AATATGAATG GACTTTACTG GGTGGCATTC TCGGTTGCGC GCTGTTGATG
GGAACCGTGC CAGCCTGGCG AGCCTACAGG CAGTCACTGG CCGATGGACT GTCGATTCGT
TTATGA
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| Protein sequence | MYLFRLALAS LANRRFTAFL TAFAIALSVC LLLAVERVRT EARASFASTI SGTDLIVGAR
SGSLNLLLYS VFRIGNATNN IRWDSFEHFA QSQQVKWAIP VSLGDSHRGY RVMGTNESYF
EHYQFGRQQH LQMAEGREFQ TDPFEVVLGS EVARALHYKL GDKLVLAHGV AAISLVKHDD
KPFTVVGILK PTATPVDRTL HISLGGMEAI HIDWHNGAPA RGNERISADQ ARNMDLTPTA
ITAFMLGLNS KISTFSLQRE INEYRGEPML AILPGVALQE LWSLMGTAEK ALFVISLFVV
LTGLIGMLTA ILTSLNERRR EMAILRSVGA RPWHIASLLI LEAFALALAG VVSGLALLYI
GIFAAHDYVL ENYGLYLSSM PPGQYEWTLL GGILGCALLM GTVPAWRAYR QSLADGLSIR
L
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