Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0481 |
Symbol | |
ID | 1182090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 528181 |
End bp | 528699 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391849 |
Product | ACT domain protein |
Protein accession | NP_790330 |
Protein GI | 28867711 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2716] Glycine cleavage system regulatory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000098406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCATC TCGTCGTAAC GCTGGTTGCC CCGGACAAAC CGGGCCAGGT CGAACGCATT GCCCAATGCA TCGCGGAGCA CGGTGGCAAT TGGCTGGAAA GCCGCATGTC ACGCATGGCC GGGCAGTTTG CCGGGATCCT CAAGGTCGGC GTCGAGCCGC AGCAATACGA CGACCTGATC AAGGCGCTGA ACGCACTGTC AGCCTATGGT ATTCGTATGC TGCTGGCCGA CAGCGCAGTA GAGACGAGCG ACACGACCCA ACTGATCAGC ATGAAACTGG TCGGCAACGA CCGCCCCGGC ATCGTGCGCG ACATCACCCG ATTGCTGGCC GGACAGGGCG TCAACGTCGA ACACCTGATC ACCGACGTCA CTCCGGCCCC CATGAGCAGC GAACTGCTGT TCCACGCCGA TGCAGTGCTG GGCGTGCCAG TGGGTTTATC GCTGGATGAT CTGCAGGCCG GGCTTGAGAC ACTGGCTGAT GATCTGATGG TGGAGTTGGT GTTGGGTGGT GAGGAGTGA
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Protein sequence | MDHLVVTLVA PDKPGQVERI AQCIAEHGGN WLESRMSRMA GQFAGILKVG VEPQQYDDLI KALNALSAYG IRMLLADSAV ETSDTTQLIS MKLVGNDRPG IVRDITRLLA GQGVNVEHLI TDVTPAPMSS ELLFHADAVL GVPVGLSLDD LQAGLETLAD DLMVELVLGG EE
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