Gene PSPTO_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0481 
Symbol 
ID1182090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp528181 
End bp528699 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID637391849 
ProductACT domain protein 
Protein accessionNP_790330 
Protein GI28867711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000098406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCATC TCGTCGTAAC GCTGGTTGCC CCGGACAAAC CGGGCCAGGT CGAACGCATT 
GCCCAATGCA TCGCGGAGCA CGGTGGCAAT TGGCTGGAAA GCCGCATGTC ACGCATGGCC
GGGCAGTTTG CCGGGATCCT CAAGGTCGGC GTCGAGCCGC AGCAATACGA CGACCTGATC
AAGGCGCTGA ACGCACTGTC AGCCTATGGT ATTCGTATGC TGCTGGCCGA CAGCGCAGTA
GAGACGAGCG ACACGACCCA ACTGATCAGC ATGAAACTGG TCGGCAACGA CCGCCCCGGC
ATCGTGCGCG ACATCACCCG ATTGCTGGCC GGACAGGGCG TCAACGTCGA ACACCTGATC
ACCGACGTCA CTCCGGCCCC CATGAGCAGC GAACTGCTGT TCCACGCCGA TGCAGTGCTG
GGCGTGCCAG TGGGTTTATC GCTGGATGAT CTGCAGGCCG GGCTTGAGAC ACTGGCTGAT
GATCTGATGG TGGAGTTGGT GTTGGGTGGT GAGGAGTGA
 
Protein sequence
MDHLVVTLVA PDKPGQVERI AQCIAEHGGN WLESRMSRMA GQFAGILKVG VEPQQYDDLI 
KALNALSAYG IRMLLADSAV ETSDTTQLIS MKLVGNDRPG IVRDITRLLA GQGVNVEHLI
TDVTPAPMSS ELLFHADAVL GVPVGLSLDD LQAGLETLAD DLMVELVLGG EE