| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0323 |
|---|
| Symbol | argE-2 |
|---|
| ID | 1181932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 351346 |
|---|
| End bp | 352494 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637391692 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | NP_790173 |
|---|
| Protein GI | 28867554 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGC CGTCCATGAA AGACCAGTTT GCCGCCTTGA TCGCTGCGCC CTCGGTGAGC
TGCACTCAGC CTTCTCTGGA CCAGACCAAC CGGCCTGTCA TCGATCTGTT GGCCGGATGG
CTCGGGGACC TGGGTTTTGC CTGCGATATC CAGCAGGTTT CCCTTGGCAA GTTCAATCTG
CTGGCCACCT TCGGCACAGG CCCCGGCGGG CTGGTACTGG CTGGCCACAG CGACACCGTG
CCGTTCGACG AGGCATTGTG GAAAACCGAC CCCTTGAAGC TCACCGAAGT CGATGGCCGC
TGGGTCGGGC TGGGCAGTTG CGACATGAAG GGCTTTTTTG CGCTGGTCAT CGAGGCCGTG
CGTGGTCTTG TCGATCAGCC GTTCAAGCAG CCCCTGTTGA TTCTCGCCAC CTGCGATGAA
GAAAGCTCGA TGGCCGGCGC GCGTGCGCTG GCAGAAGCCG GACGCCCGCT GGGTCGTGCG
GCGGTGATCG GCGAGCCGAC CGGGCTCAAG CCGATTCGCA TGCACAAAGG CGTGATGATG
GAGCGCATCC ATATCCTCGG GCGCAGTGGC CATTCGTCCG ACCCGAGCCT GGGCCATAGC
GCGCTGGAGG CGATGCACGA CGCGATCAGC GAACTCAAGG GCCTGCGCAC GCAGTGGCAG
CTTGAATACC GCAATCCACA GTTCACGGTG CCGCAGCCGA CCTTGAACCT GGGCTGCATT
CACGGCGGCG ACAACCCGAA CCGGATCTGT GGCCAGTGCT CGCTGGAATT CGACCTGCGC
CCGCTGCCGG GCATGGACCC GCAGGTGCTG CGTGCCGCCA TCCGGCAGAA GCTGCAACCG
CTGGCCGAGC TGCATCAGGT GCAGATCGAC TATGCTCCTT TGTTCCCAGA GTGCGCGCCG
TTCGAGCAGG TGGCCGACGC TGAACTTGTG CGTGTTGCCG AGCGTCTCAC CGGTCACACG
GCAGCGGCAG TAGCATTCGG CACCGAAGCG CCTTATCTTC AGCGCCTCGG TTGCGAGACG
CTGGTGCTCG GCCCTGGTGA TATCGCCTGT GCGCATCAAC CGGGGGAATA CCTCGAAATG
TCACGTCTGG ACCCTACAGT GCGTCTGTTA CGGCAACTGA TCGAGCACTA CTGCCTGACG
CCTCAATGA
|
|---|
| Protein sequence | MPLPSMKDQF AALIAAPSVS CTQPSLDQTN RPVIDLLAGW LGDLGFACDI QQVSLGKFNL
LATFGTGPGG LVLAGHSDTV PFDEALWKTD PLKLTEVDGR WVGLGSCDMK GFFALVIEAV
RGLVDQPFKQ PLLILATCDE ESSMAGARAL AEAGRPLGRA AVIGEPTGLK PIRMHKGVMM
ERIHILGRSG HSSDPSLGHS ALEAMHDAIS ELKGLRTQWQ LEYRNPQFTV PQPTLNLGCI
HGGDNPNRIC GQCSLEFDLR PLPGMDPQVL RAAIRQKLQP LAELHQVQID YAPLFPECAP
FEQVADAELV RVAERLTGHT AAAVAFGTEA PYLQRLGCET LVLGPGDIAC AHQPGEYLEM
SRLDPTVRLL RQLIEHYCLT PQ
|
|---|
| |