Gene PSPTO_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0071 
Symbol 
ID1181679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp93607 
End bp94344 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content58% 
IMG OID637391448 
Productlipoprotein, putative 
Protein accessionNP_789930 
Protein GI28867311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCCG CGCTCGTCAT TTCGCTGCTC GCCGTCATTT TGAGCGGCTG CGCCAGCCTC 
GCCGACCGCA ACCCGGACGG CACCTGGATC AACCAGACCG CCATCGACGC TGCCGTCAAA 
CAAGGCAATC TGCGTCAGGC ACTGCTCGCC AATGGCCCGA ATCTGGAGTG GAAAATCAAC 
TCCAAGGCCA ATCAGGCTAT CTACTCAAAC GGTTTCGAGC TGGGCGAAGG CAAGATTGTC 
AGTGCCGCCG AAGGCAAGCT GCACATCGAC TTCTACGGCA ACTTCTTTGA AGACCTGAGC 
GTAAAGGGCG GCGACCTGGT TCAAGCCGCC AGCGAGTCTG GCCCGGAACA ACACTTCCAG 
AAGCCAGAGA ACCCTGCGCC TGAGGGTGCC CAGCCGGGCA GCAGCTTTGA GAGAGCGCTG 
TACGGCGCTT ACATGGGTGG CAAATGGACC GTTGTTGAAG GCGACGGCCA AGGCAGCACT 
GTGCAATTCA TGCCTGATGG CAGTGTGCAG GGGCTTCCCG AAAATGATCG TTTCGCGCTA 
TGCCTGGCTG GCGATTGTGC AGCCATGAGC GGCGAATACG ACAGCATGTG GCTGGAAAAG 
GCCGAAAAGG GCAACCCTTG GATCTTCTCC CGCAAAGGCA AGCAACTGGA GATTTTCCAG 
GCAGTAAACA ATGCCGGTCC AGACCAGATG CCTGAATTGC GTCCGGGCGC ACGTCACTGG 
TTGCTGCAAC AGCAGTAA
 
Protein sequence
MRSALVISLL AVILSGCASL ADRNPDGTWI NQTAIDAAVK QGNLRQALLA NGPNLEWKIN 
SKANQAIYSN GFELGEGKIV SAAEGKLHID FYGNFFEDLS VKGGDLVQAA SESGPEQHFQ 
KPENPAPEGA QPGSSFERAL YGAYMGGKWT VVEGDGQGST VQFMPDGSVQ GLPENDRFAL 
CLAGDCAAMS GEYDSMWLEK AEKGNPWIFS RKGKQLEIFQ AVNNAGPDQM PELRPGARHW 
LLQQQ