| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0009 |
|---|
| Symbol | |
|---|
| ID | 1187316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004633 |
|---|
| Strand | - |
|---|
| Start bp | 9357 |
|---|
| End bp | 10484 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637408344 |
|---|
| Product | ParaA family ATPase |
|---|
| Protein accession | NP_808669 |
|---|
| Protein GI | 29171485 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCTG CCGATAACGA AATAGCTGAA CAGCAGAATT TTGTAGACTT CAACTCCATT
CTTTATACGC CTCAGTACGC CGCTGGCTGC TTCGGTCTGA CTACGCGTCG ACTTATGGCC
ATTGAAGAAG AACACGGCTT GGACATCAAA CGCATAAAGC GTGGGTCGTC TACATCCAGG
GTCTACACGG CCTCGGATCT TTTCAACATC GCCGCGCTGC GTCGGTCGCT AGGCCATCTC
AAACCAATTG GTCGTCAAAT TGTCGCTTCA ACCTTCGTGC CAAAGGGCGG GACTGCCAAG
ACCACTACCG CGGTCAACCT TGCTATTAGC GCTCAATTTG CAGGGATTAA GACACTAATT
ATCGATAATG ACCCTCAGGG TGATACCTCA AACATGCTGG GTTATGACCC CGACCTCAGC
CCAGATGATC TCGTCGACAT GAACATTCCT TCAGATCGGC TGGTGGATGG ACATTTTGGC
AATCTTCTCA GCCCGTTGCT TCGAATGAAG CCTTTTTCAG AAAAGGTGCT CGCTGATGTG
ATCAAAAAAC CTTTTGGCGA AAACGGCATT CATCTCATCC CGGCTGACAC ATATCTTGAG
GATTTGGCTG TTGCGCTCGA TGCTTCGAAC AATTCGGATA TGTGGTATGC CCGATTCATC
GAAGACGCAA ATGCAGGAAA AGTACCAGGA TGTGACCTTT CTGTTTATGA CCTGATAATT
ATTGACAACG CGCCTGCTGG CTCTCGATTG ACCAAGAATT CAGTTGCAGC TAGCGATCTA
TTGTTGTGCC CCGTTCGGAT GGACAAATTT TCGTTCAGAG CACTGTTAAG GTTGCATGAG
TGGTGCGCTC GATTCGCAAA AGAGTACAGC TATGCGCCTG CTCTCATGGC TATTCCTACG
ATGTTTATTC GCAAGCGCGC TAGGTTGTTA GCAAATCTTC AATCACTCAA CACGCTTTTC
CCTGGGCAGG TAACTGAGGA AAAAATCTAT TTTTCCGAAG ATTATTCGAA GTCACTGGAT
GATGGTATTC CTCTCATGTT GTGGAAGAGG GCGAACTCAC AAACCATCGA CACTGCAAGG
CTTGTCTTTG GTGAAATCTT GCAGAAGATT CGCAGCTTGG CCGCCTGA
|
|---|
| Protein sequence | MTPADNEIAE QQNFVDFNSI LYTPQYAAGC FGLTTRRLMA IEEEHGLDIK RIKRGSSTSR
VYTASDLFNI AALRRSLGHL KPIGRQIVAS TFVPKGGTAK TTTAVNLAIS AQFAGIKTLI
IDNDPQGDTS NMLGYDPDLS PDDLVDMNIP SDRLVDGHFG NLLSPLLRMK PFSEKVLADV
IKKPFGENGI HLIPADTYLE DLAVALDASN NSDMWYARFI EDANAGKVPG CDLSVYDLII
IDNAPAGSRL TKNSVAASDL LLCPVRMDKF SFRALLRLHE WCARFAKEYS YAPALMAIPT
MFIRKRARLL ANLQSLNTLF PGQVTEEKIY FSEDYSKSLD DGIPLMLWKR ANSQTIDTAR
LVFGEILQKI RSLAA
|
|---|
| |