Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5194 |
Symbol | pilY1 |
ID | 5356713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5339482 |
End bp | 5342949 |
Gene Length | 3468 bp |
Protein Length | 1155 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640814240 |
Product | type 4 fimbrial biogenesis protein PilY1 |
Protein accession | YP_001350526 |
Protein GI | 152984932 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.948738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCGG CACTCCACCA GATCGGCAAG ACCTCGCTGG CCGCCGCGCT CAGCGGCGCC ATCCTGCTTT CCGCCCAGAC CACCCAGGCC GCCGCGCTGT CGGTCAGCCA ACAGCCGCTG ATGTTGGTCC AGGGTGTCGC TCCCAACCTG CTGGTCACAC TGGACGACTC CGGCAGCATG GCATTCGCCT ACGCCCCGGA CAGTATCTCC AGCTACAGGG ACTCCACGTT CTTCGCTTCG AACAGCTTCA ACCCGATGTA CTTCGATCCA AACACCGAAT ACAAGCTGCC GAAGAAGCTC ACGCTGGTTA ACGGCCAGGT ACAGATACAG GACTATCCCG CCCCCAGCTT CACCTACGCC TGGCGCAACG GTTTCACGCG CGCGGGAGGT ATCGATCTAT CGCGCAACTA CAAGGTCACC GTAGAGTACG GCCGAGGTTA TGACCGGGAA TCGACTATCA GGCCCGCCGC AGCCTTCTAT TACGAGTTCA CCGGCTCGTC CAACTGCAGC CGCACCAACC AGAACTGCTA TACCCGTCGC TCCGTGAGCA CAGAACAGCG ACAGAACTTC GCCAACTGGT ACTCCTTCTA CCGCACCCGC GCCCTGGCCA CCCAGACCGC AGCCAACCTG GCGTTCTACA GTCTGCCGGA GAACATCCGG GTAAGCTGGC AGATGCTGAA CAACTCCTCC TGCAACCAGA TGGGTAGCGG TTCCAGCAAT GGCAATTGCT TCAACAACTA TCTGAGGGAC TTCAACGGTC AGCACCGAGT GAATTTCTTC AACTGGCTGG AAAACCTCTC AGTAGAGGGA GGCACGCCAT TACGGCGTGC GATGACTCGT GCTGGCGACT TCCTGCGCAG AACCGGCGTG AACGGCCCCT ACGCTTACCG CCCCGGCGAA CAGACCGCAC CAGAATATAG CTGCCGCGGT TCCTACCATA TCCTGATGAC CGACGGTCTC TGGAACAGCG ATTCCGCTAA CGTGGGCAAT GCAGACAGCA ACAGCAGGAC CCTTCCCGAC GGGCAACATT ACAGCAGCCA GGCGCCGTAC AAGGACAATG CCTCCAATAC CCTCGCCGAT CTGGCATTTC ACTATTGGGC CAATGACGCC AGGCCCGATA TCGAAGACAA TCTGAACCCT TTCATTACCT ACCCCGACAA GGCCAACCCC TCGGCAGAAT ATTGGAACCC GCGTAACGAC CCTGCTACGT GGCAGCACAT GGTCACCTAC ACCCTTGGCC TGGGATTGAC CACGACCCTC ATTAGCCCGA AATGGGAAGG CTCTACCTAT GCCGGCGGCT ACCAGGATAT CCAGGCGGGC CGCCTGAACT GGCCCAGCGC CGCTGTAGAC AGTGCCAATA ATGTCTATGA TCTATGGCAC GCAGCGGTCA ACTCGCGGGG AGAATTCTTC AGCGCCGACT CTCCGGATCA ATTGGTTGCA GCCTTCCAGG CTATCGTGAA CCGAATCTCC GGCGGCCCCT TGCCAGCCTC ACGTCCGGCC ATTAGCTCGT CACTGCAGGA AGATGCAACC GGCGACAAGC AGATCCGCCA CGCCTACCAG ACCAGCTTCG CCAGTGACCA GAACTGGGCA GGGGACCTGA CTCGCTACAG CCTGACCAGT CAGGACAAGG TTACCGTGCA GACCAAGCTG TGGAGCGCGC AGGCCATCCT CGACGCGATG CCCAACGGCG GCGCGGGACG CAAGATCATG ATGGCCGGCT CCGGCAGCAA CGGACTCAAG GAGTTCTCCT GGACCAGCCT CAGCGCCGAC CAGCAGCGAC AACTGAACCG CGATCCGGAC CGCAACGACG TCGCCGACAG CAAGGGCCAG GACCGCGTGG CCTTCCTGCG TGGCGACCGC AGCAAGGAAA ACAGCGACAA CTTCCGCACC CGCAACTCGA TCCTCGGCGA CATCATCAAC TCCTCGCCGG CGACCGTGGC CAAGGCCCAG TACCTCACCT ACCTGGCCCA GCCGATCGAG CCCAGCGGCA ACTACGCGCA GTTCGCCGAA GCGCAGAAGA CCCGCGCACC GCGGGTCTAT GTCGGCGCCA ACGATGGCAT GCTGCACGGC TTCGATACCG ACGGCAACGA AACCTTCGCC TTCATCCCCT CCGCGGTCTT CGAGAAGCTT CATAAGCTGA CCGCCCGCGG CTACCAGGGT GGCGCGCACC AGTTCTACGT GGACGGCTCG CCGGTGGTCG CCGACGCCTT CTTCGGCGGC GCCTGGCATA CCGTGCTGAT CGGCAGCCTG CGCGCCGGCG GCAAGGGCCT GTTCGCCCTC GACGTGACCG ACCCCGGCAA CATCAAGCTG CTCTGGGAGC TAGGCGTCGA CGAGGAGCCC GACCTCGGCT ACAGCTTCCC CAAACCGACG GTGGCCCGCC TGCACAACGG CAAGTGGGCG GTGGTCACCG GCAACGGCTA TTCCAGCCTG AACGACAAGG CCGCGCTGCT CATCATCGAC CTGGAGACCG GGGCCGTTAC CCGCAAGCTG GAAGTCACCG GCAAGGCCGG CGTGCCCAAC GGCCTGTCCA CTCCCCGGCT GGCCGACAAC AACAGCGACG GCGTTGCCGA CTACGCCTAC GCCGGAGACC TGCAGGGCAA CCTCTGGCGC TTCGACCTGA TCGCCGGCAA GGTCGACCAG AACGATCCGT TCAGCCGCGC CAACGACGGC CCGGCGGTGG CCTCCAGCTT CAAGGTTTCC TTCGGCGGCC AACCACTTTA CTCGGCGGTC GACTCGAACG GCGCGGCGCA GGCGATCACC GCCGCCCCCT CGCTGGTGCG CCATCCGACG CGCAAGGGCT ATATCGTGAT CTTCGGCACC GGCAAGTACT TCGAGAACAG CGACGCCCGC GCCGATACCA GCCGCGCCCA GACGCTCTAC GGCATCTGGG ACCAGCAGAC CAAGGGCGAG GCGGCAGGCA GTACGCCGCG CCTGAGCCGC GGCAACCTGC GGCAGCAGAC CCTGGACCTG CAGGCGGACT CGACCTTCGT CTCGACAGCC CGTACCATCC GCCTCGCCAG CCAGCATCCG GTCGATTGGC AAAGCCAGTC CGGCTGGTAC CTCGACTTCA TGGTCAACGG CACCCTCAAG GGCGAGATGC TGATCGAGGA CATGATCGCC ATCGGCCAGG TGGTGCTGCT GCAGACCATC ACCCCGAACG ACGATCCCTG TAACGATGGG GCCAGCAACT GGACCTACGG CCTCGACCCG TATACCGGCG GCCGCACCAA TTTCACGGTG TTCGACCTGG CCCGCCAGGG CGTCGTGGAC TCGAAGTCCG ACTACAGCTA CAACAAGCAG AACGTGGTGG TCTCCGGCAC CGAGCAGAAA GGCCTCGGCG GCCTGACCCT GAGCACCAAC GAACAGGGCA ACCCGGAAGT CTGCTCCTCG GGCGAATGCC TGACCGTGAA CCCCGGACCG AACACCCGTG GCCGCCAGAA CTGGCGTCCC ATCGAAGGAA AGAACTGA
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Protein sequence | MKSALHQIGK TSLAAALSGA ILLSAQTTQA AALSVSQQPL MLVQGVAPNL LVTLDDSGSM AFAYAPDSIS SYRDSTFFAS NSFNPMYFDP NTEYKLPKKL TLVNGQVQIQ DYPAPSFTYA WRNGFTRAGG IDLSRNYKVT VEYGRGYDRE STIRPAAAFY YEFTGSSNCS RTNQNCYTRR SVSTEQRQNF ANWYSFYRTR ALATQTAANL AFYSLPENIR VSWQMLNNSS CNQMGSGSSN GNCFNNYLRD FNGQHRVNFF NWLENLSVEG GTPLRRAMTR AGDFLRRTGV NGPYAYRPGE QTAPEYSCRG SYHILMTDGL WNSDSANVGN ADSNSRTLPD GQHYSSQAPY KDNASNTLAD LAFHYWANDA RPDIEDNLNP FITYPDKANP SAEYWNPRND PATWQHMVTY TLGLGLTTTL ISPKWEGSTY AGGYQDIQAG RLNWPSAAVD SANNVYDLWH AAVNSRGEFF SADSPDQLVA AFQAIVNRIS GGPLPASRPA ISSSLQEDAT GDKQIRHAYQ TSFASDQNWA GDLTRYSLTS QDKVTVQTKL WSAQAILDAM PNGGAGRKIM MAGSGSNGLK EFSWTSLSAD QQRQLNRDPD RNDVADSKGQ DRVAFLRGDR SKENSDNFRT RNSILGDIIN SSPATVAKAQ YLTYLAQPIE PSGNYAQFAE AQKTRAPRVY VGANDGMLHG FDTDGNETFA FIPSAVFEKL HKLTARGYQG GAHQFYVDGS PVVADAFFGG AWHTVLIGSL RAGGKGLFAL DVTDPGNIKL LWELGVDEEP DLGYSFPKPT VARLHNGKWA VVTGNGYSSL NDKAALLIID LETGAVTRKL EVTGKAGVPN GLSTPRLADN NSDGVADYAY AGDLQGNLWR FDLIAGKVDQ NDPFSRANDG PAVASSFKVS FGGQPLYSAV DSNGAAQAIT AAPSLVRHPT RKGYIVIFGT GKYFENSDAR ADTSRAQTLY GIWDQQTKGE AAGSTPRLSR GNLRQQTLDL QADSTFVSTA RTIRLASQHP VDWQSQSGWY LDFMVNGTLK GEMLIEDMIA IGQVVLLQTI TPNDDPCNDG ASNWTYGLDP YTGGRTNFTV FDLARQGVVD SKSDYSYNKQ NVVVSGTEQK GLGGLTLSTN EQGNPEVCSS GECLTVNPGP NTRGRQNWRP IEGKN
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