| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5125 |
|---|
| Symbol | |
|---|
| ID | 5356059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5273563 |
|---|
| End bp | 5274318 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640814171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350461 |
|---|
| Protein GI | 152986852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.702011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA GTGGCCGGCA TATCCTGCTC AACTGCGACA TGGGCGAAAG CTTTGGCGCC
TGGCGCATGG GCGACGACAC CCACAGCATG CCGCTGGTTG ACCAGGCCAA CCTGGCCTGC
GGTTTCCATG CCGGCGACCC GCTGACCATG CAGCGCTCGG TGGCGCTGGC GGTGCGTCAC
GGGGTGAGCA TCGGCGCGCA CCCGGCCTAT CCCGACCTGA GTGGCTTCGG CCGGCGTTCG
CTGGCCTGCT CCGCCGAAGA GGTACATGCC ATGGTGCTGT ACCAGATCGG CGCGCTGGAC
GCCTTCTGCC GCTCCCTCGG TACCCAGGTC GCCTATGTGA AGCCGCATGG CGCGCTGTAC
AACGACCTGG TCGCCGACGA CGAACTGCTG CGCGCGGTGC TCGACGCCTG TGCCGCCTAT
CGCAAGGGCT TGCCGCTGAT GGTGCTGGCG CTGGCCGACA ACGCCCGCGA ACTGCAACTG
GCCGACGAAG CCGACGTGCC CCTGCTGTTC GAGGCTTTTG CCGATCGTGC CTACCTGCCG
GACGGAAGGC TGGCGCCGCG GCGGCTTGGC GGCGCGGTGC ATCGCGATCC GCAGCGGATC
ATCGGACAGG CGCTGGCCAT CGCCCGCGGC GAAGCCTTCG CCGACTACGA TGGCAACCCG
TTGCGCCTGA CCGCCGACAG TCTTTGCGTG CATGGCGACA ACCCGGAGTC GCTGGCGGTG
CTCCGGCGCC TGCGCGCGGC CCTGGGCAGC CTGTGA
|
|---|
| Protein sequence | MNDSGRHILL NCDMGESFGA WRMGDDTHSM PLVDQANLAC GFHAGDPLTM QRSVALAVRH
GVSIGAHPAY PDLSGFGRRS LACSAEEVHA MVLYQIGALD AFCRSLGTQV AYVKPHGALY
NDLVADDELL RAVLDACAAY RKGLPLMVLA LADNARELQL ADEADVPLLF EAFADRAYLP
DGRLAPRRLG GAVHRDPQRI IGQALAIARG EAFADYDGNP LRLTADSLCV HGDNPESLAV
LRRLRAALGS L
|
|---|
| |