Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4835 |
Symbol | |
ID | 5356343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4974714 |
End bp | 4975259 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640813881 |
Product | ECF subfamily RNA polymerase sigma-70 factor |
Protein accession | YP_001350176 |
Protein GI | 152986271 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAT CGCCGCAAAG CGCGATGGTC AAGCTGTTCC TTGCCTCCTA CGACGACTTC AAGGCGCGCC TGAAGCGGCG CCTGGGTTCC GAGGACCTGG CCAGCGATGT CCTGCACGAG ACCTATCTGC GGGTCGACCG GATGGATCAC GCCCTGGAGG TCAGGAAGCC CCAGGCCTAC CTGTTCCGCA TCGCCCTGAA CATCGCCGCC GACCGCCGCG AGGGCGACGC CCGGCTGCTC ACCGGGGAGG AGGTGGCGGA GCTACTGCAG GTGCCCGACG AAGGCCTCGA CCCGGAACGC ATCGTCGGTG GCCACGCCGA CATCCGCCGC CTGGTGGAGG CGCTCTGCGA GCTGCCCGCG CGGCGCCGGC AGATCCTCAT CGCTTCGCGC CTGGAGGAAA CGCCGCACCT GGAGATTTCC CGTCGCTTCG GCATTTCCAC CCGCACCGTG GAGAAGGAAC TCAAGGCCGC GCTGTGGTAC TGCGCGGAGC GTCTAGAAAG AAAAGTCATC CAGAGGTTCG GTCCCGGGGC CGGAAAACCG TCATAA
|
Protein sequence | MSESPQSAMV KLFLASYDDF KARLKRRLGS EDLASDVLHE TYLRVDRMDH ALEVRKPQAY LFRIALNIAA DRREGDARLL TGEEVAELLQ VPDEGLDPER IVGGHADIRR LVEALCELPA RRRQILIASR LEETPHLEIS RRFGISTRTV EKELKAALWY CAERLERKVI QRFGPGAGKP S
|
| |