| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3500 |
|---|
| Symbol | |
|---|
| ID | 5354349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3628204 |
|---|
| End bp | 3630006 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640812550 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001348858 |
|---|
| Protein GI | 152987730 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.623073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCG CAATGCATCT CCCTCTCCTC GGCTGCCTGA TCGGCGCCAG CGGCTGCCAG
GGCCTGCCGC CCAGCTCTCC GACGACAAGC GCCGATCCGG AACACTACGG CGAGGTCATC
GACTACCTGC AACAGCATAT CCGCCAGCAG ATGAAGATCC AGAAGATCCC CGGCCTCGCC
CTGGCGCTGG TCGATGATCA GCAACTGATC TGGGCACGCG GCTTCGGCTA CGCCGACGTC
GAACGCAGGA GCAACGCCAG CGAGCACACC GCCTTCCGCG TCGGCGGCCT GTCCAAACTG
CTGACCGCCA GCGCCTCGCT GCAACTGGCA GAGCGCGGGC TGCTGCCGCT CGACAGCCCC
CTGCAGGACA GCCTGCGCGA GTTCTACGTC CGCTCGCGGT TCCATGCCGA CCAGGGCGAG
GCGGATCGCG CCGTTACCAT CCGCCGGCTG CTCAGCCACC AATCCGGCCT GCCTGGCGAC
CACATGCCGG ATCTGTTCGA CGACCGCCCA CTGCCACTGG CACAGCTGCC CGCGAAAGTA
TCCGGAGTCT GGCTGAGCAA TCCACCCGGA ACCCAGGTCG CCTATTCCAA CCTGGGCTAC
GCACTGCTCG GCGCGGCCAT CGAACGCAGC AGCAGCGAGG ATTTCGAGCA GCACCTGCAG
GACAGCCTCC TGCGCCCCCT GCAGATGTCC CACTCCAGCT TCGCCACGCA CACGCGGACG
GAACAGCATC GCGCCCGCGG CTACGGCGCC ACCGAAGACG AGTCCCGCGA CCTGCCGGCC
AACGGTTTGT GGGCCAGCCC GGCCGACCTC AGCCGCTTCG TCCGCATGCT GTTCGCCGAC
GGCCGGTACA AGGACCGGCA GTTGCTGCGC AAGCAGTCGG TCGAGGAGAT GTTCCGCCAG
CAGAACGCCG GCAACGTCCT GGACTTCGAC TGCCAGGTGG GTCTCGCGTG GTTCCTGACG
TCCTGCGGCA CGCCGCCCCT CGAAAACGCC GGACGCCACT ACGCCTACGC AGGAAGCGCA
GCGGGCTTCC ATGCCTACCT GATCCTGGCA CCGGAGCAGC GCCTGGCGGC CATCGTCATG
AGCAATTCCG CCGCCGCCGG CAGCCTCACC TCCTCCCTGG CGCGGCATGC GCTTTCGCTG
ATGCTGCGGG TCAAGCAAAG CGGCGCGCCC ACCCCGATGA CAACGACGCC CTCCAGATCC
GCGGGCCTGG CAGTACCAAG CCCCATGGAT CGCCAGCGGC TGAGCGGTCA TTACGCGACC
AGTCTTGGAC TGGTTCGCCT GCACGAGCGC AAAGGCCGCC TGTATGCCGA CTTCGGCGAC
CAGCGCGTGG AGCTGCTGCG CAATGCCGCG GGCTGGCTCC AGGCGAGAAA ACGGCTGCTG
GGACTCTGGC CCGTCGACCT GAAGGAACCC GGGCAACCGC AACTGGACGT CGTCAGCCAT
GGTCAGCGAC AGATCCTGGT CTGCCGCCGC CACGGACGAA CCACCTACCT TGGCGAGCGC
ATCGCCCGGA CACCCCTGCC CCAGGCCTGG GTAGATACCG TCGGCAGCTA CCGCGTCTCC
GGCAATGGCG GGCACAGCTA CCTCGATGGC CTGTCGATCA GGCTAGCGGA TGGCTTCCTG
CTGGTGCGCG GACGAACCGG AAACGGCCAG CTCGGCGAAT TCATCCTGCA ACCCGTGGAC
AGCGCGCATG CGGTCCTGGC CGGCAGCGGC CAGGGCCTGG GGGACACCTT CAGCCGTGAC
TTCGACGGCC TGAACGCGCT CGGCTACCGC TTCGCCCGCC AGGGCACCCA GGCATCACCC
TGA
|
|---|
| Protein sequence | MFRAMHLPLL GCLIGASGCQ GLPPSSPTTS ADPEHYGEVI DYLQQHIRQQ MKIQKIPGLA
LALVDDQQLI WARGFGYADV ERRSNASEHT AFRVGGLSKL LTASASLQLA ERGLLPLDSP
LQDSLREFYV RSRFHADQGE ADRAVTIRRL LSHQSGLPGD HMPDLFDDRP LPLAQLPAKV
SGVWLSNPPG TQVAYSNLGY ALLGAAIERS SSEDFEQHLQ DSLLRPLQMS HSSFATHTRT
EQHRARGYGA TEDESRDLPA NGLWASPADL SRFVRMLFAD GRYKDRQLLR KQSVEEMFRQ
QNAGNVLDFD CQVGLAWFLT SCGTPPLENA GRHYAYAGSA AGFHAYLILA PEQRLAAIVM
SNSAAAGSLT SSLARHALSL MLRVKQSGAP TPMTTTPSRS AGLAVPSPMD RQRLSGHYAT
SLGLVRLHER KGRLYADFGD QRVELLRNAA GWLQARKRLL GLWPVDLKEP GQPQLDVVSH
GQRQILVCRR HGRTTYLGER IARTPLPQAW VDTVGSYRVS GNGGHSYLDG LSIRLADGFL
LVRGRTGNGQ LGEFILQPVD SAHAVLAGSG QGLGDTFSRD FDGLNALGYR FARQGTQASP
|
|---|
| |