Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3364 |
Symbol | |
ID | 5358970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3481842 |
End bp | 3483749 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640812415 |
Product | putative TonB-dependent receptor |
Protein accession | YP_001348724 |
Protein GI | 152988891 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.346597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTCC TCTACCTGTT CCCCTGCCTG GCGCTGGCTG CGCCGGTCGA CCTGGAGCCC ACGGTGGTCA GCGCCACCAA TACCGAGCGC AAGCTGCGCG ACGCCCCGGC CAGCATCTCG CTGATCGCCG CCGAGGACCT GCGGCGGCGC CCGGTGCGCG ACCTGCAGGA AGCTCTGCGC GGTTCGGAAA GCCTGCAGTT CAACGGCGTC GGCATGTCCC GGCGGGGCAT CAGCGTTCGC GGCATGTCCA GCGAGCACAC CCTGGTGCTG GTGGACGGCC AGCGGATTTC CACCTCGTCC GGGGCCATCG CGCATTCCGA CTTCGACCTC GGCTGGGTGC CGGTGGAAAG CATCGAGCGC ATCGAGGTGG TGCGCGGGCC GATGTCCTCG CTCTACGGTT CGGAAGCCCT TGGCGGGGTG GTGAACGTGA TCACCCGGCG CGCCACCGAT ACCTGGACGG GCAGCGGCCT GCTCGATGGC GGTGTGCGCG AGGACGGACT CGGCGGACAG AACCACCAGC TCGGCGCCTA TCTCTCCGGG CCGCTGGTGC CCGGCAAGCT GGGCCTCGCC CTGAATGGCG AGAGCCGCCG CCAGCAGGAA ACCCCGGACG CCGACGATCG CCGGCTTTCC GAGCTGGAGG GCGGCAACGC CGACAGCGCC GGGCTGAACC TCAGCTGGAC TCCTGACGAA GCCCAGCGCA TCGAGCTCGG CCATCAGCGC GGGCGCGAAC GACGCTGGCG CAACAGCGAG ACCGGCGGGC CGCGCTCGCG CTACTACGAG TCGCGCGACG TGATCGAACG CGAGCGCTGG TCGCTCGCCC ACAATGGCCA GTGGGACTGG GGCAGCAGCC AGCTGCGCAC CTACCGCAAC CGCCTGGAGC GGCACAACGC ACGTTCCGAC GGACAATCGC CGAGCAACCC GCAGCGCCTT ACCGACAGCG TGGTCGACGG CCACCTCAGC CTGCCGGCCT TCGAGCGGCA TCTCTTCACC CTCGGCGGCG AATGGCGCAA GGAAGAACTG GAGGATCGCT CGGTGAATAC CGCCGGCGAC GCCAGCGCGC GACACAAGGC GTGGTTCCTG CAGGACGAGA TCGCCTTCGG CCCGGACTGG TCGCTGACCC TCGGCAGCCG CTTCGACAAG CATGAGGCGT TCGGCTGGGA AAGCAGTCCG CGCCTGTACC TGCTGCACCA TCTTTCCGAT GCGCTGACCC TGCGCGCCGG TGTCGGCCGC GGCTACAAGG CGCCGAGCCT GAAGCAGTTG TCGCCGGAGT ATGCGGCGGT GGGCGGCGGC GGGCGCTTCA CCATCTACGG CAATCCCGAC CTGAAGCCGG AAACCAACAC CTCCTACGAA CTGGGCGCCG ACTACCAGGG CGACGGCTGG ACGCTGAAGG GCACGCTGTT CGAGAACGAC GTCAACGACC TGATCCAGAC CGTCTGCGTA GCGCGCTGCG GGGTACGCGG CGCCGAAGTG CGCAACTACG AGAACGTCGA GAAGGCGCGG ATCCGCGGCA TCGAACTGGG TGGTGGCGTC GACCTGCCCG CGGACCTGCG CTGGGAGTTC AACTACACCT ATCTCGACGC GCGCAACCGC ACCGTTGGCC AGCGCCTTGG CGACCGTGCC CGCCACCTCG CCAACAGCCA GTTGCGCTGG ACGCCCGACG CGCACTTCAG CGCCCAGTTG CGCACCGAAT ACGTCGGCAG CCAGGTGACC TACAGCAGCA ACGTCGGCTA TGCCTTGCCG GCCTACAGCC TGTGGCACCT GGAGCTGAGC CGGAAGCTCA GCGAGAACCT GACCCTGCGC GGCGGCATCG AGAACCTCGG CGACCAACGC CTGGCCGACG ACGACACGCA CTTCACCTAT GCCGAACCTG GGCGGACCTT CCATCTCGGT CTGGTGGCGA GCTTCTGA
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Protein sequence | MPVLYLFPCL ALAAPVDLEP TVVSATNTER KLRDAPASIS LIAAEDLRRR PVRDLQEALR GSESLQFNGV GMSRRGISVR GMSSEHTLVL VDGQRISTSS GAIAHSDFDL GWVPVESIER IEVVRGPMSS LYGSEALGGV VNVITRRATD TWTGSGLLDG GVREDGLGGQ NHQLGAYLSG PLVPGKLGLA LNGESRRQQE TPDADDRRLS ELEGGNADSA GLNLSWTPDE AQRIELGHQR GRERRWRNSE TGGPRSRYYE SRDVIERERW SLAHNGQWDW GSSQLRTYRN RLERHNARSD GQSPSNPQRL TDSVVDGHLS LPAFERHLFT LGGEWRKEEL EDRSVNTAGD ASARHKAWFL QDEIAFGPDW SLTLGSRFDK HEAFGWESSP RLYLLHHLSD ALTLRAGVGR GYKAPSLKQL SPEYAAVGGG GRFTIYGNPD LKPETNTSYE LGADYQGDGW TLKGTLFEND VNDLIQTVCV ARCGVRGAEV RNYENVEKAR IRGIELGGGV DLPADLRWEF NYTYLDARNR TVGQRLGDRA RHLANSQLRW TPDAHFSAQL RTEYVGSQVT YSSNVGYALP AYSLWHLELS RKLSENLTLR GGIENLGDQR LADDDTHFTY AEPGRTFHLG LVASF
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