| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3097 |
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| Symbol | |
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| ID | 5355992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3213053 |
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| End bp | 3214654 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812148 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001348457 |
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| Protein GI | 152988090 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.230012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC GTGGGACGGC TGTCGAAGGC CGGATCGACT GGCAACGGAT CCTGCTGATC
CTGTTCACCA CCACCCTGGT GGGCGGCGTC TGCGGGATCT TCGTGATCAA CGAGCTGGAT
CGCCAGCACG ACGGGGCGCA CCTGGCGTCC TATACCGAAA TGGCCCTGGA GCGGGCGCTG
GAGATCTCCT CGGCGGCCGA CCAGATGCTC GCCGAGATGA ACGCCGGCAG CGCGCCGGCC
TGCAGCGACC GCGACCTGGA GATGCTGCGC TCGATCGTGC TCGAGTCGCG TTTCATGAGC
GACGTCGGCC GGATCAGCGG CAACCAGGTG ATCTGTACCG GGGTGCGCGG CCGCTTGCGC
GCGCCCTGGG GGCTGTCCGC ACCCGACCGG GTCGACCGCG CCGGCACCCG CTTCTGGTCC
GAGGGCATGC CGTTGCCGCT GCAGGTGCTG CCGACCGGCC TGGTCGCCCG CGGCAACGCC
ATCGTGTTCA TCGCCCCGCA TGCCTATTTC GACGTCGACC ACCCGGACGC CGGCATCTCC
GCCGCCGCCG TCTCGGCCAA CGGCGACTAC ATCTACCACC GCTTCGCCGG TGAGCAGCGC
CCGGCCCCGG AGATGCCCGG CAGGCCCGCT TGGCCGGAAG TCTCCGGCGC CCGCCAGGCA
AGCCGCTGCG AGCCGGACCA GGACCTCTGC GTGGTCTCCC ACCTGCGCGA GCGCGGCCTG
CTGAACACCG AGCCGGACCG CGCCGCCATG GCCGCGGCGA TGGGCGGCGG GCTGTTCTTC
GGGGTCATGT TGCTGCTGAG CTACCTGTTC GGCTTCCTCA GCGACGAGAA GCTTCCCGCC
AGGCTCCTGC GCGCGTTGAA GCGCGAGGCG CTGGAGGTGC ACTACCAGCC GATCGTGCGC
CTGGCGGACG GCCGCTGCAT CGGCGTCGAA GCCCTGGCGC GCTGGACCGA CAGCAGCCTG
GGCCGGGTGT CTCCCGACAT ATTCATCGGC GCCCTGGAAG AAAGCGGCGA CATCCAGTTG
CTGACCCGCT TCGTCTTCCG CCGTGCCCTC AGGCAGCTGG GCCCGCTGCT GAGAAAGGAG
CCGGGGTTCT ATGTCAGCAT CAACGTGACC GGCAAGGACA TCGCCAATCC CGGATTCATC
GACTTCGCCA TCCGCCAGAT GGCCCGCGAG CGCGTGCTGC CTGCACAGGT CGCCCTGGAG
CTGACCGAAC GCACCACCGA GGCCCAGGTC TGCCTGCTGG CGGGGATGAA CCGCCTGCGC
GAGCTGGGCC TGAAGATCTA CGTGGACGAC TTCGGCACCG GCCACTCGAA TCTGGTCTAC
CTGGCCAACC TGCCGGTGGA CGCGATCAAG ATCGACAAGG TCTTCACCCA GTCGATCGGC
GAAAGCGAAG CCGTCGAGCT GATCTTCGAC AAGCTCTGCT CGATGGCCGA ACAGTTGCAG
ATCGGCGTGG TGGTCGAAGG AATCGAAACC CAGGCCCAGG CGGACTACGT CTCGCGCCGC
TCGCCCGAAG CCCTCGGCCA GGGCTGGCAC TTCGGCAGGG CGTTGGCGCT TGAGGCCTTT
CTCGCCTATT ACCGGGATCC CCCCGCCCGC ATGCGGCCAT GA
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| Protein sequence | MSERGTAVEG RIDWQRILLI LFTTTLVGGV CGIFVINELD RQHDGAHLAS YTEMALERAL
EISSAADQML AEMNAGSAPA CSDRDLEMLR SIVLESRFMS DVGRISGNQV ICTGVRGRLR
APWGLSAPDR VDRAGTRFWS EGMPLPLQVL PTGLVARGNA IVFIAPHAYF DVDHPDAGIS
AAAVSANGDY IYHRFAGEQR PAPEMPGRPA WPEVSGARQA SRCEPDQDLC VVSHLRERGL
LNTEPDRAAM AAAMGGGLFF GVMLLLSYLF GFLSDEKLPA RLLRALKREA LEVHYQPIVR
LADGRCIGVE ALARWTDSSL GRVSPDIFIG ALEESGDIQL LTRFVFRRAL RQLGPLLRKE
PGFYVSINVT GKDIANPGFI DFAIRQMARE RVLPAQVALE LTERTTEAQV CLLAGMNRLR
ELGLKIYVDD FGTGHSNLVY LANLPVDAIK IDKVFTQSIG ESEAVELIFD KLCSMAEQLQ
IGVVVEGIET QAQADYVSRR SPEALGQGWH FGRALALEAF LAYYRDPPAR MRP
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