| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2268 |
|---|
| Symbol | |
|---|
| ID | 5354422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2324725 |
|---|
| End bp | 2326527 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640811321 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001347640 |
|---|
| Protein GI | 152985115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGA CCGTACGCAT CGGCTGCGCC TCGGCCTTCT GGGGCGACAC CTGTACCGCC
GCCGCCCAAC TGGTGCGCGG CGCGCCGCTG GACTACCTGG TGTTCGACTA CCTGGCCGAG
ATCACCCTGT CGATCATGGC AGGGGCCCGC CTGAAACAGC CGGACGCCGG CTACGCCACC
GACTTCGTCG AGGTCCTCGC GCCGCTGCTC GCAGAGATCG CCGGGAAGAA CATCCGGGTG
ATCAGCAACG CCGGCGGAGT CAATCCACAG GCCTGCGCAG CCGCCCTCGC CGCGGCCTGC
GAAAAGACCG GGGTGCGGCT GAAGATCGCC GTGCTGCACG GCGACAACCT GCAACCACGC
CAGGCCGAGC TGGCCAAGGC TGGCATCCGC GAGATGTTCA GCGACGCGCC GTTGCCGCCG
ATGTGCGTCT CGATCAACGC CTACCTCGGC GCGCCGGGCA TCGTCGAGGC CCTGCGCCTG
GGCGCGGATA TCGTGATCAC CGGCCGGGTG GTCGACAGCG CGGTGGTCAG CGCCGCCCTG
GTCCATGAGT TCGGCTGGGC CTGGGACGAC TATGACCGCC TGGCCCAGGC CGCCCTCGCC
GGGCACATCG TCGAATGCGG CGCACAATGC ACCGGCGGCA ACTTCACCGA CTGGGAGCAG
GTGCCGGACT ACGAGCACAT CGGCTTCCCC ATCGTCGAGG TCGAGGCCGA CGGGCGTTTC
GTGGTGACCA AGGCGCCGGG CACCGGCGGC CTGGTCAGCG AACTGAGCGT CGGCGAACAG
ATGCTCTACG AGATCGGCGA TCCACGCGCC TACCTGCTGC CCGACGTGGT CTGCGACTTC
ACCGAGGTGC GCCTGCGCCA GGCCGGTCCC GACCGGGTCG CGGTGGAGGG TGCGCGCGGC
CTGCCGCCCA CTGACCGGTA CAAGGTCAGC GCCACCTATC CGGACGGTTT CCGCTGCACC
GCCAGTTGCC TGATCGCCGG CATCGACGCG GTGAAGAAGG CCGAGCGGGT CAGCCGGGCG
ATCATCGCCA GGACCGAGGA ACTCTTCGCC GCACGCGGCT GGGAACCCTA CCGCGAGGTC
AGCATCGAGC TGCTCGGCAG CGAAGCCACC TACGGCCCCC ACGGGCGGCG CCAGGACAGC
CGCGAAGTGG TGGTCAAGCT GGCCGCGCGG CATCCGCGCA AGGAGGCCCT GGTGCTGTTT
TCCCGCGAGA TCGCCCAGGC CGCCACCGGG ATGGCGCCGG GCCTGACCGG AATCGTCGGC
GGCCGGCCGA CGGTGTATCC GGTGATCCGC CTGTTCTCCT TCCTGATCGA CAAGGCGCAA
TGTGCGTTGA GCGTGGAGAT CGACGGCCGG CGCCATCCGC TGGAACTGCC GCGCCTCGAA
GCCTTCGACC CGGCGCGATT GGCCGAGGCG CGCCAGCCAC CGCGCCCGGA GCAGCCCGCC
AGCGCCAGCG TGGCGCTGGT GAAGCTGGCG GTGGCCCGCT CCGGCGACAA GGGCAACCAC
AGCAACATCG GGGTCATGGC GCGGCGCCCG GAGTACCTGC CGTGGATCGC CGAGGCGCTG
GAGGAAGGCG CGGTGGTGGA CTGGATGCAG CACGTGCTCG ACCCGCAGAC CGGCCGGGTC
GGCCGCTGGT ACCTGCCGGG CAGCCACAGC CTGAACTTCC TGCTGGAGAA TGCCCTCGGC
GGCGGCGGCG TCGCCAGCCT GCGCATCGAC CCGCAGGGCA AGGCCTTCGC CCAGCAGTTG
CTGGAGTTCC CGGTGGCGGT GCCGCAGGCG CTCGCCGACG CGCTGGAGAC GCAGGGCAGG
TAA
|
|---|
| Protein sequence | MQKTVRIGCA SAFWGDTCTA AAQLVRGAPL DYLVFDYLAE ITLSIMAGAR LKQPDAGYAT
DFVEVLAPLL AEIAGKNIRV ISNAGGVNPQ ACAAALAAAC EKTGVRLKIA VLHGDNLQPR
QAELAKAGIR EMFSDAPLPP MCVSINAYLG APGIVEALRL GADIVITGRV VDSAVVSAAL
VHEFGWAWDD YDRLAQAALA GHIVECGAQC TGGNFTDWEQ VPDYEHIGFP IVEVEADGRF
VVTKAPGTGG LVSELSVGEQ MLYEIGDPRA YLLPDVVCDF TEVRLRQAGP DRVAVEGARG
LPPTDRYKVS ATYPDGFRCT ASCLIAGIDA VKKAERVSRA IIARTEELFA ARGWEPYREV
SIELLGSEAT YGPHGRRQDS REVVVKLAAR HPRKEALVLF SREIAQAATG MAPGLTGIVG
GRPTVYPVIR LFSFLIDKAQ CALSVEIDGR RHPLELPRLE AFDPARLAEA RQPPRPEQPA
SASVALVKLA VARSGDKGNH SNIGVMARRP EYLPWIAEAL EEGAVVDWMQ HVLDPQTGRV
GRWYLPGSHS LNFLLENALG GGGVASLRID PQGKAFAQQL LEFPVAVPQA LADALETQGR
|
|---|
| |