Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2236 |
Symbol | |
ID | 5357882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2290515 |
End bp | 2291288 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640811289 |
Product | short chain dehydrogenase |
Protein accession | YP_001347608 |
Protein GI | 152986616 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACC ACTCCATCAA GGGCAAGACC GTCCTCATCA CCGGCGGCGC CAAGAACCTG GGTGGGCTGA TCGCCCGCGA TCTCGCTAGC CACGGCGCGA AGGCTATCGC CATCCATTAC AACAGCGCGG CGAGCAAGGC CGATGCCGAC GCCACCGTCG CCGCGCTGCA GGCCGCCGGC GCCAAGGCCG TGGCCCTGCA GGGCGACCTC ACCAGCGCGG CGGCCATGGA AAGGCTGTTC GCCGACACCA TGGCCGCGGT CGGCAAGCCG GACATCGCGA TCAATACCGT GGGCAAGGTG CTGAAGAAGC CCTTCACCGA AATCAGCGAA GCCGAGTACG ACGAGATGTC CGCGGTCAAC GCCAAGTCGG CGTTCTTCTT CCTGCGCGAG GCCGGCAAGC ATGTCAACGA CAACGGCAAG ATCTGCACCC TGGTGACCTC CCTGCTCGGC GCCTATACCC CTTACTACGC CGCCTACGCT GGCACCAAGG CGCCGGTCGA GCACTTCACC CGTGCCGCCT CCAAGGAGTT CGGCGCGCGC GGCATCTCGG TCACCGCGGT CGGCCCGGGA CCGATGGACA CGCCGTTCTT CTACCCCGCC GAAGGCGCCG ACGCGGTGGC CTACCACAAG ACCGCCGCGG CGCTGTCGCC GTTCTCCAGG ACCGGCCTGA CCGATATCGA GGACGTGGTG CCGTTCATCC GCCACCTGGT CAGCGACGGC TGGTGGATCA CCGGCCAGAC CATCCTCATC AACGGCGGCT ACACCACCAA GTGA
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Protein sequence | MADHSIKGKT VLITGGAKNL GGLIARDLAS HGAKAIAIHY NSAASKADAD ATVAALQAAG AKAVALQGDL TSAAAMERLF ADTMAAVGKP DIAINTVGKV LKKPFTEISE AEYDEMSAVN AKSAFFFLRE AGKHVNDNGK ICTLVTSLLG AYTPYYAAYA GTKAPVEHFT RAASKEFGAR GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSPFSR TGLTDIEDVV PFIRHLVSDG WWITGQTILI NGGYTTK
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