Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1542 |
Symbol | |
ID | 5359550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1565194 |
End bp | 1565982 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640810595 |
Product | putative transcriptional regulator |
Protein accession | YP_001346926 |
Protein GI | 152988324 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.409159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTT TCACCTTGCA GGATATCGCC TGGCACCGCT CCGTCGGACA ACTGGTCGAA GCGCTGGACG CACCGGACTT CTGGATCCGC CTGGTGCGCC TGCTCGACCA GTATGTGCCC TTCGACAGCT GGGTGGCCCT GCTTTTCAGC CAGGGCCGCC CCCAGGTGTT CGCCGAGTGC CCGGGGGCCG ACGGCGGGCC GGACCCGCTG TTCCAGGACT ACCTGCGCGG TCTCTACCTG CTCGACCCGT TCTACATCGC CAGCCGCGAG AATCCGGGGA GCGGCCTGTT CCGCCTGGCC GACGTGGCCC CGGAGTGCTT CGAGCAGACC GATTACTACC AGCGCTACTT CCGCCTCAAC GTGGTGGCCG ATGAAATCCA GGTCAACGTG CAACTGGCCG GCGAACGCAC CCTCTGCCTG TCGCTCGGCT CGCGGCAGCG CTTCACGCCG GAACAGCTCG CCGTGCTCGG CCTGGTGCGG CCCTGGGTGG CCGGGCTGAT GCGCCAGCGC CTGGCCTTCG AGGACGAGGT GCTGAACAGC CCGGCGCCGC CGGAGCCGGG CTGGCAGGGC TCGCTGGAGA AAGTCGCGGA ACAGATGGGT ACGCCATTGA CCGCGCGCGA ACTGGAAGTC GGCCGGCTGA TGCTCAGCGG CTGCTCGAGC AAGGAGATCG CCCGCAAGCT GGCGATCTCG GCGGAAACCG TGAAGGTCCA CCGCAAGCAC ATGTACGGCA AGCTCGGCAT CAAGTCGCAG TCCGAGCTGT TCGGCCTGTT CCTCCAGGCC CAGGGCTGA
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Protein sequence | MMSFTLQDIA WHRSVGQLVE ALDAPDFWIR LVRLLDQYVP FDSWVALLFS QGRPQVFAEC PGADGGPDPL FQDYLRGLYL LDPFYIASRE NPGSGLFRLA DVAPECFEQT DYYQRYFRLN VVADEIQVNV QLAGERTLCL SLGSRQRFTP EQLAVLGLVR PWVAGLMRQR LAFEDEVLNS PAPPEPGWQG SLEKVAEQMG TPLTARELEV GRLMLSGCSS KEIARKLAIS AETVKVHRKH MYGKLGIKSQ SELFGLFLQA QG
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