Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1414 |
Symbol | gspF3 |
ID | 5355269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 1428931 |
End bp | 1430148 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640810467 |
Product | general secretion pathway protein F |
Protein accession | YP_001346798 |
Protein GI | 152985154 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0648646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCCT ATGAATACCT CGCCATGTGC AACGCCGGAC GCCGCAGCCG CGGCGTGCAG GAAGCCGACA GCCTGCGCCA GGCGCGCCAG CTGCTGCGCG AACGCAACCT GGTCCCCCTG CAGGTCAGGC CGGCGCGGGG CAGCCGGGCT CCGGACCAGG CCGCGGGAGC ACCCTCCAGC CGCGCCCTCG GCGCCGCCGA GCTGGCCCTG CTTACCCGCC AGCTGGCCAC CCTGGTACAG GCCGCCCTGC CCCTGGAGGA AGTCCTCTCG GCGGTCGCCG CGCAATGCGA GAAGCGCAGC CGGCAGGGCA TGCTCCTGGC GATCCGCTCG CGGGTCCTCG AAGGACACGG CCTGGCCCGC GCCATGGGCG AGTTCCCCCG CGCCTTCCCG GCGCTGTACC GGGCCACCGT GGCCGCCGGC GAACGCGCCG GCCACCTCGG CCAGGTGCTC ATGCAACTGG CCGACTACAC CGAGGCGCGC CAGGCCGCGC GCCAGCAGAT CCAGCTGGCG ATGCTGTACC CGGGCATCCT CCTGCTGGCG GCCTTCGGCA TCGTCGGCTT CCTGCTCGGT TTCGTGGTAC CGGACGTGGT CAAGGTGTTC ATCGACAGCG GCCAGGAGCT GCCGGTCCTG ACCCGCGGGC TGATCGCCCT GAGCAACCTG CTGCGCGACT ACGGGATGCT CCTGCTGGTG ATCGGCGGCG GCCTCTCCGG GGCCGCCCGA ATGGCCCTGC GCAAGCCCGC CGCGCGCCTG CGCTGGCACC GTCTCCAGTT GCGCCTGCCA TTGCTCGGAC GGGTGATCCG CGCCAGCAAC TGCACCCGCT TCGTCAGCAC CCTGGCGATC CTCGGGCGCA GCGGCGTGCC GCTGGTGGAC GCGCTGGAGA TCGCCGCCGA GGTGGTCGCC AACCAGCAGA TTCGGACCGG TCTGAAAGAC GTCGCCCGCT CCGTGCGCGA AGGTGGCGGC CTGACCCGGG CGCTGGAACG GAGCGGGCAT TTCCCGCCGA TGATGCTCTA CATGATCGCC AGCGGCGAAC GCTCCGGCGA GCTGGACGCC ATGCTCGACC GCGCCGCGCG CCAGCAGGAA GCCCAGCTGG CGAACCGCAT CGCCATGCTG GTCGGCCTGT TCGAGCCGGC GATGCTGGTG TTCATGGGCG CCAGCGTACT GCTCATCGTG CTGGCGATCC TGATGCCCAT CCTCAGCCTC AACCAACTCA TCACCTGA
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Protein sequence | MAAYEYLAMC NAGRRSRGVQ EADSLRQARQ LLRERNLVPL QVRPARGSRA PDQAAGAPSS RALGAAELAL LTRQLATLVQ AALPLEEVLS AVAAQCEKRS RQGMLLAIRS RVLEGHGLAR AMGEFPRAFP ALYRATVAAG ERAGHLGQVL MQLADYTEAR QAARQQIQLA MLYPGILLLA AFGIVGFLLG FVVPDVVKVF IDSGQELPVL TRGLIALSNL LRDYGMLLLV IGGGLSGAAR MALRKPAARL RWHRLQLRLP LLGRVIRASN CTRFVSTLAI LGRSGVPLVD ALEIAAEVVA NQQIRTGLKD VARSVREGGG LTRALERSGH FPPMMLYMIA SGERSGELDA MLDRAARQQE AQLANRIAML VGLFEPAMLV FMGASVLLIV LAILMPILSL NQLIT
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