Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_1096 |
Symbol | |
ID | 5359314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 1094758 |
End bp | 1095468 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640810150 |
Product | hypothetical protein |
Protein accession | YP_001346482 |
Protein GI | 152986834 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00551431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTGGC AGGCCGCCCT CGCGGCGGTG ATCCACCATC CGTTGTTCGG CGTCGGCGTG ACGCTCGGCG CCTACCAACT GGCCCTGGCC GCCTACGAAC GGACCCGCTG GGTATTCCTG CAGCCGGTGC TGGTGTCGAT GCTGGTGGTG ATCGGCGTGC TGCTGCTCTG CGGCATCGAC TACGAGGAAT ACAGCGCCAG CGCCAAGGTC CTGACCATCC TCCTCGGTCC CGCCACGGTA GCCCTGGCGG TGCCGCTGTT CCTCAACCTG CGGCGTATCC GCCAATTGTT CTGGCCGACC CTGCTGACCC TGGTCGTCGC CGGTACGCTG GCGACGGTGC TGGGCATCGC ATTCGGCTGG CTGTTCGGCG CCGAACCGCG GATGCTGATG AGCATGGCGC CGAAGTCGGT GACCTCCCCG ATCGCCATGC TGGTGGCCAG TCAGATCGGC GGCGTGGCGG CGCTGGCCGC CGTGTTCGTC CTGATCACCG GGGTCCTCGG GGCGATCCTC GGCCCGGAGC TGTTGCGCGC CATCGGTGTC CGCCATCCCG CCGCGCAGGG CATGGCGCTG GGCATGACCG CCCATGCGGT GGGCACTTCG CGGGCCTTGC AGGAGGGCGA GGAGTGCGGC GCCTTCGCCG CCCTGGCGAT GAGCCTGATG GGCGTCGCCA CCGCAGTGCT GCTAACGTTG GCGGTAGCGC TGGTCGCCTG A
|
Protein sequence | MAWQAALAAV IHHPLFGVGV TLGAYQLALA AYERTRWVFL QPVLVSMLVV IGVLLLCGID YEEYSASAKV LTILLGPATV ALAVPLFLNL RRIRQLFWPT LLTLVVAGTL ATVLGIAFGW LFGAEPRMLM SMAPKSVTSP IAMLVASQIG GVAALAAVFV LITGVLGAIL GPELLRAIGV RHPAAQGMAL GMTAHAVGTS RALQEGEECG AFAALAMSLM GVATAVLLTL AVALVA
|
| |