| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0780 |
|---|
| Symbol | |
|---|
| ID | 5356186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 777295 |
|---|
| End bp | 779133 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640809834 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001346175 |
|---|
| Protein GI | 152983876 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.612791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGA ATAGCAATGG CAGCCTGACG CTCGACCTGG TCCTTCGCAG CGAAGGGTAC
AGGGCCGGGA TGGACAAGGT TGGCAGGATC AACGATCAGA AAATGCGCGC CATGGAGGCG
CGCGCGGAAA AGGCTGGCAA GGCTATCGGC AAAAGCCTGG ACAGTTCGGC GCTGATTGCC
AGCAGCGTGC TCGACCAGGC GCTGGACATG TTGGGCAAGA CCACCCGGCA GGCGGAGCAG
GCGAAGAAGC CTGCGCAGAA AGCCCAGGAC AAGGTGCTGG CCGAGTGGAA GACCCGGCAG
AAGGAGCTGG GCGAAGCCTG GAAGAGCTAT CGCGAGCCAC TCCAGGATCT GTCCAAGCTC
AACGAAGCAC TACTGAAGAA CTCCTCCGAC AAGCTCGACA AGGCGCTGCT CAATCTCAGC
GAGACCGGCA AGCTGTCGCT TGCCAACGTG GGCAAGACCG CCTACGCCGA TGCCGCGCGC
CTCGCCTCGC GGCAGATGAC GCTGATGCTG CTGGACGGGC TGTTTGGCTG GGTCGCCAGC
GTCGGTACCG AGAAGCCCAA GGTCGACGAC AAGGCGGGCA AGGGACTGGC GAAGGCCGGC
GACGACGAGA AGGAACAGCC GTCGCTCCAG TCGCAGGTCT TCAAGCAGTG GCTGTTGCAG
ATGAACAGTG TCTGGGGCGC CTACCGCGTG CCCCTGCAGG ATATCTCCGG GATGACCGAC
GAGCTGTTCA GGAACGCGTC GGAGAAGCTC GAGAAGTCGC TGTTCAATTT CGCCACTACC
GGAAAGCTGT CCTTGAGCAA TTTCGCCAAG ACGGTGATCG ACGATGTCGC CCGGATCGCC
GCGCGGCAGC TTTCAATGCT CGCTCTGGAT GGACTGTTCG GCTGGTTGAA TGACAAGGCC
GGCATCACCG AGGCGCAACT GGCCAGCCAG AAGCCCCATA CCTCCCTACT GGAAAAGGCC
CGTTCGGATG CGGGACAAGC GGCAGCGGGC GTTCCCGCAG CCCAGGGTGC CGCGCCAATA
CCGGCTGCGA CTATGGATGT CGGTGCGATG GTGGCCACTG CTTCCGGGCA GACCGGGGAT
GGTTCCAAGG CATCGGGCGC GGATGCTTCG GTGAGCGCTG GCAAGCCGGT GGGCAGTTGG
GTCGAACAGA TGGACGCCTC CTGGGCGAGC CTGCGCGACC AGGCGCAGGA CGTTTCGGGA
ATGATGGACA CGCTGTTTAC CAACGCCTTC ACCAATATGG AGAACGCCCT GTTCACCTTT
GCTACCACGG GCAAGCTGTC GTTCAAGGAT TTCGCCGACT CGGTGATCCA GGATATGGCG
CGGATCGCCG CGCGGCAGGC GACGCTGCAG ATCATCGGCG GCATCGTCGG TACGGTCAGC
GGGTTCTTCG GTAGCGGCGC AACGGCGGGC TCGCGGATTT CCGACTACAC CGGCGCGGAC
ATGGCCAACT GGGTCAGCAA GCAACGCGCC GGAGGCATGC CTGGGTTCGC CAGGGGCGGT
GCCTTCAACG ATGGCATCCA GAGCGCGCCG GCGCTGTTCA GCATGGCCGG CGGTCGTCCG
GCGCTGATCG GCGAGCGTGG GCCGGAAGCC ATCATGCCGC TGAGCCGCGG TTCCGATGGC
GTGCTCGGCG TGCGCGCGCT CGGCGGCGGC GAGGGGGGCA ATGTCTTCAA TTTCTCCACC
AGCGTCAGCC TGGGCGGCAG CCGTGAGGGT GCGGCGACGG CCAGCGGCGA CGTCGGTACG
GGACAGCAGC TGGCGGGAAT GATCAACGAT GCCGCGCGCA ACGTGGTGGC GCAGGAGCTG
CGCCCCGGCG GCCTGGTATG GAGGATGGTG AATGGCTGA
|
|---|
| Protein sequence | MATNSNGSLT LDLVLRSEGY RAGMDKVGRI NDQKMRAMEA RAEKAGKAIG KSLDSSALIA
SSVLDQALDM LGKTTRQAEQ AKKPAQKAQD KVLAEWKTRQ KELGEAWKSY REPLQDLSKL
NEALLKNSSD KLDKALLNLS ETGKLSLANV GKTAYADAAR LASRQMTLML LDGLFGWVAS
VGTEKPKVDD KAGKGLAKAG DDEKEQPSLQ SQVFKQWLLQ MNSVWGAYRV PLQDISGMTD
ELFRNASEKL EKSLFNFATT GKLSLSNFAK TVIDDVARIA ARQLSMLALD GLFGWLNDKA
GITEAQLASQ KPHTSLLEKA RSDAGQAAAG VPAAQGAAPI PAATMDVGAM VATASGQTGD
GSKASGADAS VSAGKPVGSW VEQMDASWAS LRDQAQDVSG MMDTLFTNAF TNMENALFTF
ATTGKLSFKD FADSVIQDMA RIAARQATLQ IIGGIVGTVS GFFGSGATAG SRISDYTGAD
MANWVSKQRA GGMPGFARGG AFNDGIQSAP ALFSMAGGRP ALIGERGPEA IMPLSRGSDG
VLGVRALGGG EGGNVFNFST SVSLGGSREG AATASGDVGT GQQLAGMIND AARNVVAQEL
RPGGLVWRMV NG
|
|---|
| |