| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5238 |
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| Symbol | |
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| ID | 1042379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5972205 |
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| End bp | 5972693 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637148637 |
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| Product | hypothetical protein |
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| Protein accession | NP_747339 |
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| Protein GI | 26991914 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCG ATGCCTATAT CCAAATCGCG GAAATTACTG GCGAAGCGCT GGACCAGCAA
TACGCCAACT GGATCGAAAT CGTCGGTTAT AAATTCGGTG TCAGCCAAAG CACCTCAGCC
ACCGCAAGCT CTGCGGGTGG CGCATCTTCA GGGCGCACCA CCCTCACCAA TTTCACCTTC
ACCAAATACC TGGACAGTGC CAGCTGCAAG CTTCTTGAAG CCAGTTGTGC CGGCCAGCAC
CTAAAGGAAG TGAAGCTGGT GGTATGCCGT GCTGGTACCG ACAAGCTCAA GTACTACGAA
GTCGTTCTCG AAGAAGTGAT CATCGCCGAC TACGCCCAGA GCGCCAGTTC CGGCGTCCCG
ATGGAAGTCG TACAGCTCAA CTACGGGCGG ATCAATACCA CCTACACGCG GCAGAAGCGC
CTCGACGGCA GCGCGGGCGG CAACGTCACG GGCGGTTGGG ACCGTATCAA CAACAAGAAG
TATGCGTGA
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| Protein sequence | MAFDAYIQIA EITGEALDQQ YANWIEIVGY KFGVSQSTSA TASSAGGASS GRTTLTNFTF
TKYLDSASCK LLEASCAGQH LKEVKLVVCR AGTDKLKYYE VVLEEVIIAD YAQSASSGVP
MEVVQLNYGR INTTYTRQKR LDGSAGGNVT GGWDRINNKK YA
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