Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5176 |
Symbol | |
ID | 1041593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5903181 |
End bp | 5903735 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637148575 |
Product | hypothetical protein |
Protein accession | NP_747277 |
Protein GI | 26991852 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00299086 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAGT ATCTGCCATA TCCAGAAACC ATCAGGCATC GGCCATCCCC GTTCCAACCG CTACCTTTCA CAGGGAGGCT CACATTCAAG GAAGATCAAA ATGCCGTTAG CCGAATGCCA CCGATTGCGC CGTGGGCGCT TCTCCGAGCC CGGCAGGCTC TACAGCTGAC CACCATCACG CATCAACGCA AACCACTGTT CCGCGACTTC CACCATGCCC GTCTGGTGGT CAAACACCTT CGGGCCTCAG ATGACATTCA GGACTGCCAA TCGTTGGCCT GGGTAGTGAT GCCGGACCAT CTGCATTGGC TGATTGAGCT GAAAGAAGTG ACATTGGGAA CGTTGATGCG CAAGTTCAAA TCACGCACAG CGATTGCCTT GCGCAAGGCC GGTGTCGGGC ACAAGCCGAT ATGGCAACCG GGTTACCAGG ACCATGCGCT GCGGCAGGAA GAGTGTGTGG TTCATGTAGC CCGGTACATT GTTGCCAATC CCTTGAGGGC TGGATTGGTC AGAAGTATCA GGGACTATCC ACATTGGGAT GCGGTATGGC TTTGA
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Protein sequence | MYQYLPYPET IRHRPSPFQP LPFTGRLTFK EDQNAVSRMP PIAPWALLRA RQALQLTTIT HQRKPLFRDF HHARLVVKHL RASDDIQDCQ SLAWVVMPDH LHWLIELKEV TLGTLMRKFK SRTAIALRKA GVGHKPIWQP GYQDHALRQE ECVVHVARYI VANPLRAGLV RSIRDYPHWD AVWL
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