Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5165 |
Symbol | |
ID | 1042564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5890823 |
End bp | 5891608 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148564 |
Product | NLPA lipoprotein |
Protein accession | NP_747266 |
Protein GI | 26991841 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.644217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA CCCTGCTGAC CACTGCCCTG GCTGCTGCCC TGTCGTTCTC CGGCCTGGCC GCTGCTGCCG AGAAACTGGT GGTTGCCGCT ACCCCGGTAC CGCACGCCGA AATCCTCGAA TTGATCAAGC CGACCCTGGC AAAAGAAGGC GTGGACCTTC AGATCAAGGT CTTCACCGAT TACGTGCAGC CGAACGTGCA GGTGGACCAG AAGCGTCTGG ACGCCAACTA CTTCCAGACG CTGCCGTACC TGCAGAACTT CAACGAAGGC AAGGGCACCC ACCTGGAAAC CGTGGTGGGT GTACACGTAG AGCCCTTCGG TGGCTACTCG AAGAAGGTCA AGGCCCTGAG CGAGCTGAAA GAAGGCGCAA CCGTTGCCAT CCCTAACGAG GGCAGCAACA GCGGCCGTGC GCTGCTGCTG CTGCAGAAGG CCGGCCTGAT TACCTTGAAA GACCCGAAGA ATGCCCTGGC CACCCCCAAG GATATCGCCG AGAACCCGAA GAAGCTGAAG TTCCGCGAGC TTGAGTCGGC CATGCTGCCC CGTGTGCTGG ACCAGGTCGA CCTGGACATG ATCAACACCA ACTACGCCCT GGAAGCTGGC CTGAACCCGG CTAAAGATGC ACTGGTGATC GAAGGTGCCG ACTCGCCTTA CGTGAACTTC CTGGTGGCCC GCCCGGACAA CAAGGACAGT GAGGCCATCC AGAAACTGGC CAAGGCCCTG ACCAGCCCGG AAGTCAAGGC ATTCATTGCC AAGAAGTACC AAGGTGCCGT ACTGCCGGCG TTCTGA
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Protein sequence | MKKTLLTTAL AAALSFSGLA AAAEKLVVAA TPVPHAEILE LIKPTLAKEG VDLQIKVFTD YVQPNVQVDQ KRLDANYFQT LPYLQNFNEG KGTHLETVVG VHVEPFGGYS KKVKALSELK EGATVAIPNE GSNSGRALLL LQKAGLITLK DPKNALATPK DIAENPKKLK FRELESAMLP RVLDQVDLDM INTNYALEAG LNPAKDALVI EGADSPYVNF LVARPDNKDS EAIQKLAKAL TSPEVKAFIA KKYQGAVLPA F
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