| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5134 |
|---|
| Symbol | |
|---|
| ID | 1042601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5857443 |
|---|
| End bp | 5858813 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148533 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747235 |
|---|
| Protein GI | 26991810 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1160] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGA CTGAGCCACT GAAACTGGCC GTGGTCGGCC ATACCAATGT TGGCAAAACC
TCGCTACTGC GCACCCTGAC CCGCGACGTC GGTTTTGGCG AAGTGTCCCA CCGCCCCAGC
ACTACTCGCC ATGTGGAAGG TGCACGGCTG TCGGTGGACG GTGAACCTTT GCTGGAGCTG
TACGACACGC CCGGCCTGGA AGATGCCATC GCCCTGCTCG ACTACCTTGA ACGCCTGGAG
CGCCCAGGCG AGCGCCTGGA CGGCCCTGCC CGGCTGGAGC GTTTTCTGCA GGGCAGCGAA
GCGCGCCAAC GCTTCGAGCA GGAGGCCAAG GTATTGCGCC AACTGCTGGC CAGTCATGCC
GGCCTGTATG TGATCGATGC GCGCGAGCCG GTGCTGGCCA AGTACCGCGA CGAACTGGAA
GTGCTGGCCA ACTGCGGCAA GCCGTTGCTG CCGGTGCTCA ACTTCGTCGC CAGCAGCCAG
CACCGCGAGC CTGAATGGCG TGAAGCCCTT GCCCGGCTTG GGCTTCACGC ATTGGTACGG
TTCGACAGCG TGGCCCCGCC AGAGGATGGT GAGCGCCGTT TGTACGAAAG CCTGGCGCTG
CTGCTGGAAA ACGCCCGCCC GGCGCTGCAA CGGCTGATCG ACGACCAGCA GGCACAGCGT
TTGGCACGCC GGCACAGCGG CAAGCGCCTG ATCGCCGAAC TGCTGCTCGA TTGCGCTGCA
TGCCGGCGCA GTGTCGAGGC CGAACCAGCG GCAGAAGCTC GGGCCATCGA AGCGCTGCGC
CAGGACATAC GCCAACGAGA ACAACGCTGC GTCGAAGCCT TGCTCAAGCT GTATGCCTTC
CGCCGCGAGG ACGCCCATGC CAGCGACCTG CCGTTGCTGG ACGGCCGCTG GGGCGATGAC
TTGTTCAATC CGGAAACGTT GAAACTGCTG GGCGTGCGCC TGGGCAGCGG CGTGGCGGCG
GGGGCGGCAG CGGGGGCCGG GGTCGACTTG CTGGTTGGTG GCCTTACCCT CGGCGCGGCG
GCGCTGGCCG GGGCGATTGC CGGCGGTGCG CTGCAGACGG CGCGCAACTA TGGTTCGCGG
TTGATGGGCA AGCTCAAGGG CAAGCGCGAG CTGACCGTGG ACGACACGGT ATTGCGTCTG
CTGGCCTTGC GTCAGCAGCA GTTGATGGTG GCGCTGGATA ACCGCGGGCA TGCGGCGCAA
GACAGCATTC GCCTGGGTGA GCTGGATGAA AAGGCCTGGC GTGAGGGCAA GTTGCCGGAG
GCGTTGGTCA AAGCGCGGGC GCACCCGCAG TGGTCCACCC TGAATCCCGG GGCCAAGCTG
AATCAGGCTG AGCGGCAGGA GCAGTTGGAG GCGCTGGTTT CACAGATTTG A
|
|---|
| Protein sequence | MAMTEPLKLA VVGHTNVGKT SLLRTLTRDV GFGEVSHRPS TTRHVEGARL SVDGEPLLEL
YDTPGLEDAI ALLDYLERLE RPGERLDGPA RLERFLQGSE ARQRFEQEAK VLRQLLASHA
GLYVIDAREP VLAKYRDELE VLANCGKPLL PVLNFVASSQ HREPEWREAL ARLGLHALVR
FDSVAPPEDG ERRLYESLAL LLENARPALQ RLIDDQQAQR LARRHSGKRL IAELLLDCAA
CRRSVEAEPA AEARAIEALR QDIRQREQRC VEALLKLYAF RREDAHASDL PLLDGRWGDD
LFNPETLKLL GVRLGSGVAA GAAAGAGVDL LVGGLTLGAA ALAGAIAGGA LQTARNYGSR
LMGKLKGKRE LTVDDTVLRL LALRQQQLMV ALDNRGHAAQ DSIRLGELDE KAWREGKLPE
ALVKARAHPQ WSTLNPGAKL NQAERQEQLE ALVSQI
|
|---|
| |