Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5133 |
Symbol | |
ID | 1041652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5856065 |
End bp | 5857456 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637148532 |
Product | hypothetical protein |
Protein accession | NP_747234 |
Protein GI | 26991809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.908181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGACC TTGTGACTGC ACCCACGCCA CTGGACAAGC GCTGGCTCAC CGAAGCGGTA CGCCTGCGCG AAGAACATGC CGGCCCGCTG GAAGACCAGG AAGCCAACCG CCACGCCCGC CAGCTAGGTG GCGACCTGGC CACGCGCATC GAAACACGTG CGCTGTTCCT GGCCGAGCGC GATGACATGA CCGGCGCCCT GCGCCATTGG AAGCAGGGCG CGCGTCTGGC GCTGCTGGCC CTGCTGCTGA TGGCCGTGCT CAGCGGCACG GGCCTGGGGC TGGCCGCCCT CGGTGACGGG CAGCGCCCGG TGAATGTGTT CTGGGCGCTG GGCAGCCTGC TCGGGCTGAA CCTGCTGATG CTACTTGGCT GGGGCATGGG TTTTGCCCTG AGCGGCGAGC ATGGCGCAGG GCTGGGCCGC TTGTGGCTGT GGCTAAGCGA ACGCTTTGCC CGCGATGCCA AGGCCGCGCA CCTGGCGCCA GCGCTGCTGG TGCTGCTGCA ACGTCAACGC CTCAACCGGT GGCTGCTCGG CCTGTTGGTA CACGGCCTGT GGCTGCTGGC GATGCTCACC GCGCTGGGCA TGCTACTGGT CTTGCTGGCG ACCCGGCGCT ATGGCTTTGT CTGGGAAACC ACCTTGCTCG CCGCCGACCC GTTCATTCAC CTGACCCAAG CACTGGGCGC CCTCCCGTCG TTGCTGGGCT TCGCCGTGCC CGACGAAGCC ATGATCCGCG CCAGCGGCGA CAGCCTGCCA GCCCTGGACG TGGCCCGCCA GGCCTGGGCC AGCTGGCTGC TCGGCGTGGT GCTGGTATAC GGCCTGCTGC CCCGCCTGCT GCTGGCCGGG TTATGCCTGT GGCGCTGGCG CCAGGGCCGT GAACGCCTGA CGCTGGACCT GGGCCTGCCC GGCTACGCGC AACTGCGCGA GGCACTGATG CCGCGCAGCG AGCGCATCGG CGTGCAGGAT GCTGCCCCGC AAGCCTTGCC ACAGTTTGCC GCCGGGCAGC TGGAAAGCGG CAGCAGCGGT GCCCTGCTGG TGGGCCTGGA GCTGGACGAC CAGCGCCCTT GGCCACCGGC CCTGCCCAAA AGCGTGACCG ATGCCGGCGT GCTCGACAGC CGCGAATCAC GCAACCGGCT GTTGGAGCAG CTCAGCCGCT TCCCACCGGC ACGCCTGGCC ATCGCCTGCG ACCCACGCCG CTCGCCCGAC CGCGGCAGCT TGGCGCTGCT CGCCGAACTG GCGCGCAATG CCGGCGCAAC CCGTATCTGG CTGCTGCAGG CTGCACCGGG CCAGCCCCTC GATGCCGAGC GCCTGGGCGA TTGGCACGAA GCCCTTGACC GCCTTGGCCT GCAACATGCC GACACCTCAC CGCTGACCTG GCTGGAGCAT GGCCATGACT GA
|
Protein sequence | MEDLVTAPTP LDKRWLTEAV RLREEHAGPL EDQEANRHAR QLGGDLATRI ETRALFLAER DDMTGALRHW KQGARLALLA LLLMAVLSGT GLGLAALGDG QRPVNVFWAL GSLLGLNLLM LLGWGMGFAL SGEHGAGLGR LWLWLSERFA RDAKAAHLAP ALLVLLQRQR LNRWLLGLLV HGLWLLAMLT ALGMLLVLLA TRRYGFVWET TLLAADPFIH LTQALGALPS LLGFAVPDEA MIRASGDSLP ALDVARQAWA SWLLGVVLVY GLLPRLLLAG LCLWRWRQGR ERLTLDLGLP GYAQLREALM PRSERIGVQD AAPQALPQFA AGQLESGSSG ALLVGLELDD QRPWPPALPK SVTDAGVLDS RESRNRLLEQ LSRFPPARLA IACDPRRSPD RGSLALLAEL ARNAGATRIW LLQAAPGQPL DAERLGDWHE ALDRLGLQHA DTSPLTWLEH GHD
|
| |