Gene PP_5126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5126 
Symbol 
ID1041695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5846826 
End bp5847596 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content58% 
IMG OID637148525 
Productputative signal transduction protein 
Protein accessionNP_747227 
Protein GI26991802 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACC CGGACCTGGA AACCATCGCC AAGCTGATTT CCCAGGACCC GGGCCTCTCC 
GGCGCCTTGC TCAAGCTGGT CAACTCTCCG CACTTCGGCT TGTCGAACAA GATCGGTTCG
ATCCAGCGTG CGGTGAACCT GCTAGGTAGC CGTTCGATCA TCAACCTGAT CAACGCCCAG
TCGATCAAGG GCGAGATGAG TGACGAGACC ATCGTTACCC TCAACCGCTT CTGGGATACC
GCCCAGGACG TCGCGATGAC CTGCCTGACG CTGGCCAAGC GTACCGGCAT ACAGGCGGCG
GACGAGGCCT ATACCCTTGG CCTCTTCCAT GACTGTGGCG TGCCGTTGAT GCTCAAGCGT
TTCCCCGATT ACATGGACGT GCTGGAAGAG GCATACGCCA AAGCCGACGA AGAAACACGC
GTGGTCGATA CCGAAAACCG CACGTTCAAC ACCAACCATT CAGTGGTCGG CTACTTCACA
GCCAAATCCT GGCGCTTGCC CGAGCACCTC AGTGCGGCCA TCGCCAACCA CCACAATGCC
TTGGCCGTGT TCCGCGACGA TACCTCGCGC AATACCCAGA GCCAGCTGAA AAACCTGCTG
GCGGTGCTGA AGATGGCTGA GCATATCTGC GCGTCCTACC GGGTGCTGGG CAACCAGGCG
GTGGACCACG AATGGAATGT GGTGGGCCCC TTGGTGCTCG ATTACATTGG ATTGTCGGAA
TACGATTTCG AAAACCTCAA GCAGAACATT CGCGAGTTGG GCGGACACTG A
 
Protein sequence
MPDPDLETIA KLISQDPGLS GALLKLVNSP HFGLSNKIGS IQRAVNLLGS RSIINLINAQ 
SIKGEMSDET IVTLNRFWDT AQDVAMTCLT LAKRTGIQAA DEAYTLGLFH DCGVPLMLKR
FPDYMDVLEE AYAKADEETR VVDTENRTFN TNHSVVGYFT AKSWRLPEHL SAAIANHHNA
LAVFRDDTSR NTQSQLKNLL AVLKMAEHIC ASYRVLGNQA VDHEWNVVGP LVLDYIGLSE
YDFENLKQNI RELGGH