| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5072 |
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| Symbol | |
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| ID | 1041661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5788835 |
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| End bp | 5790112 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148471 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_747173 |
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| Protein GI | 26991748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.348741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTT CATTGCGCCA GAGGTACCCG CCCGTGAAAA CTGCAGTAGC CCCCCTCCTC
CTTGAGCCAA AACCTGCCAT CCTGACCGAA ATGTGGATCG AAAAAGGCAC ACCCGCCTTC
ATGAAAACCG TGCTGGCCTT GTTCAGCGGC GGTTTCGCCA CCTTCGCCTT GCTGTACTGC
GTACAGCCGA TGATGCCTCT GCTGTCCCGG GAGTTTGCCA TCAACGCGGC ACAGAGCAGC
CTGGTGCTGT CGGTGTCCAC CGCCATGCTG GCGTTCGGCC TGCTGATCAC CGGCCCCATT
TCTGACCGCA TCGGACGCAA GCCCGTGATG GTGTTCGCGC TGGTCTGCGC CGCCCTGTCC
ACCTTGGCCA GCGCAGTGAT GCCCAGCTGG GAGCTGGTAC TGGCCACCCG CGCATTGGTC
GGCCTGTCGC TGAGCGGCCT GGCGGCAGTG GCGATGACTT ACCTGAGCGA AGAGATCCAC
CCGCAACACA TTGGCCTGGC CATGGGCCTG TACATCGGCG GCAACGCGAT TGGCGGCATG
AGCGGGCGTC TCATCACGGG CGTACTGATC GACTTCGTCA GCTGGCACAC GGCGATGCTG
ACCATTGGCG GCCTGGCCCT GGTGGCCGCG CTGGTATTCT GGAAGGTGCT GCCGGAGTCA
CGCAATTTCC GCGCACAGAC GATGAACCCA CGCAGCCTGC TGGACGGCTT TGTCATGCAC
TTCAAGGACG CCGGCCTGCC CTGGCTGTTC CTTGAAGCCT TCCTGCTGAT GGGCGCCTTC
GTCACATTGT TCAACTACAT CGGCTACCGC CTGCTGGCCG AGCCCTACCA CATGAACCAG
GCGCTGGTCG GCTTGCTGTC GGTGGTTTAC CTGTCGGGTA TCTACAGTTC TGCACAGGTC
GGCGCCCTGG CGGACAAACT GGGCCGGCGC AAGGTGTTCT GGGCCAGTAT CGTGGTAATG
GCGGTTGGCT TGCTGATGAC GCTGGCCAGT CCACTGGTGA TGGTGATCGT GGGCATGCTG
GTGTTCACCT TCGGCTTCTT TGGTGCGCAC TCGGTGGCCA GCAGCTGGAT CGGCCGCCGG
GCGCTGAAGG CCAAGGGGCA GGCGTCGTCG CTGTACCTGT TCTGCTACTA CGCTGGCTCC
AGCGTGGCCG GTACGGCGGG CGGGGTGTTC TGGCACCAGT GGGGCTGGAA CGGGATCGGG
CTGTTCATTG GCAGCTTGCT GGCGGTGGCC TTGATGGTGG CGTTGCACCT GAGCAAGTTG
CCACCCAAAA CGGTGTGA
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| Protein sequence | MLFSLRQRYP PVKTAVAPLL LEPKPAILTE MWIEKGTPAF MKTVLALFSG GFATFALLYC
VQPMMPLLSR EFAINAAQSS LVLSVSTAML AFGLLITGPI SDRIGRKPVM VFALVCAALS
TLASAVMPSW ELVLATRALV GLSLSGLAAV AMTYLSEEIH PQHIGLAMGL YIGGNAIGGM
SGRLITGVLI DFVSWHTAML TIGGLALVAA LVFWKVLPES RNFRAQTMNP RSLLDGFVMH
FKDAGLPWLF LEAFLLMGAF VTLFNYIGYR LLAEPYHMNQ ALVGLLSVVY LSGIYSSAQV
GALADKLGRR KVFWASIVVM AVGLLMTLAS PLVMVIVGML VFTFGFFGAH SVASSWIGRR
ALKAKGQASS LYLFCYYAGS SVAGTAGGVF WHQWGWNGIG LFIGSLLAVA LMVALHLSKL
PPKTV
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