Gene PP_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4978 
Symbol 
ID1043669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5670490 
End bp5671575 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID637148378 
Producthypothetical protein 
Protein accessionNP_747080 
Protein GI26991655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGCCA TGCAGCACAC CCAACCTTCG CGCCCACAGC TTGTATACCT GGCTTTTGGC 
CCGGCAACCT ACCATCAGGA AGCCTGCTTC AGCATCGTCA GCGCCCTCGC CCAGCTAGGC
AGCGCAGCCG GCGAGGCCAT GGACATCCAG GTCTACACCG ACAATGCGCA GCCATACGCC
AGGCTGCCCG TCACCGTCCA CCTGCTGGAC GAGGCCACGC GCCAGGCATG GAATGCCCCG
CACGGTTATC ACTTTCGCAG CAAGCATGTG CTGTTGCGCC AGGTACTGCA GCAACACCCG
CTGGCAGTGC TGATCGACAC CGACACCTTC TTCCGCACTT CGCCGTTGCA TCTGTTCGCC
CGCGTGGCGC CCAACCGCCT GCTGTGCAAC GCCATCGGCA CGCGCTACGG CGCTGACCAG
AAGTGCCTGT TGTACAAGAA CCTGCTGGCC ATTCTCGAGT CCCGGGGACT GGCCGACTGC
CAGATGCCGC TCGTCAATTC CGGCGTTATC GGCCTCACTG CCGAGAACTG CGACACCCTG
GACCGCTCCA TCGCCATGAT GGACGAATTC TACCCCTTGG CTCGAGAGGC CTATACCCTC
GAGGAGTTCT GCCTGGCAGT GGCGGCCTAC CGCAACCTGG AGCTGGCCGA GTGTACCGAT
GTCATCCATC ACTACTGGAG CCGGAAGGCG CAGTTCCGCG CCAAGATCCA GGCCTGGCTG
CGCAAGCACG AGCACGACCC ACTCAGCCCC CCGGCCCTGG CCGACGTTGC GCTGGTCAAC
GATCAACTGC CGCGGCCACC CACTCTGCAC CGCCTGGGTT ACAAGGCGTT GAGCCTGACC
CTGCCCAGTC ACGAGCGCCA GTTCGCCCGC GAATTGCTCT ATGGCTGCTA CCCCTACCCC
AATGAGTTCG ATCGCGCCTG TGCGTCTGCC TGGTGGGACA AGGCCCTGGA AAACCTCAAT
GACCGCTACG GCCACGTGGA GCCCGAGCGG CTGCGTCAGT GCCTGCGCCA TCCGGGGCTA
CGGCTATCGC TGGGCGAGCG GCGCAAGGAT ATCGAGGCGC ATCTGCTGCG ATCCACCCAA
GCCTGA
 
Protein sequence
MPAMQHTQPS RPQLVYLAFG PATYHQEACF SIVSALAQLG SAAGEAMDIQ VYTDNAQPYA 
RLPVTVHLLD EATRQAWNAP HGYHFRSKHV LLRQVLQQHP LAVLIDTDTF FRTSPLHLFA
RVAPNRLLCN AIGTRYGADQ KCLLYKNLLA ILESRGLADC QMPLVNSGVI GLTAENCDTL
DRSIAMMDEF YPLAREAYTL EEFCLAVAAY RNLELAECTD VIHHYWSRKA QFRAKIQAWL
RKHEHDPLSP PALADVALVN DQLPRPPTLH RLGYKALSLT LPSHERQFAR ELLYGCYPYP
NEFDRACASA WWDKALENLN DRYGHVEPER LRQCLRHPGL RLSLGERRKD IEAHLLRSTQ
A