Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4936 |
Symbol | |
ID | 1041818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5617471 |
End bp | 5618646 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148337 |
Product | O-antigen polymerase |
Protein accession | NP_747039 |
Protein GI | 26991614 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTATC AAAAAAACTG GGCACAAGCG TGGTTAGGTT TGGGCCTGGT CTGGTTCCTG GCGGCGATTG CCCTGGCACC CAGCAACAAG GTTTATCAGC AAGGTCTGGT GTTGTTCTTG TGGCTGCCAA CGCTGGTATT GGCCTGGTCG GCCCGAGGTG TGCTGGTGCA AGCCTGGAGG CGGCAACCGG CGCTGTGGGG GAGTGTGCTG CTGCTGTTGG CCTGGAGCGG GCTGAGCCTG GCATGGTCGC CCGCCGAGGA GCCCATGCGC GAGCTCAAGC GCTTGCTCTA CATCCTGGTG TTCCTGCTGG CGTTTCCGCT GTTGGCCCAG CTTGGCCAAG CCCGCATTCG TCAGTTATTG CTGCTTGGCA GCGCGCTGCT GGCCATCGCT GCGTTGGTCT CCATCATCAA GTTCTATGGG GTGCAGCGTG CGCCTTTGCT GTTCAGGCTG GCGGGTATCG GCGAGATATC CCACCCCATC CTGGGGGCTT ATGTCATTGG TTCGGCCTTG CTCTTGATGC TCTACGAGCC ACCTCGGCGA CGTGGCTTGC AGTTGTTGTG GCTGGCGGCA CTGGCTTGCC TGGGGGCCTT CGCCATGCTC AGCCAGAGCC GTGGTGCGGT TCTGGCACTG GTGATTACCG TGGTGATGGC GCCGTTGTGG TTCCGTGACC GCCACAGCCG GGTGTTCTCT GTTCTGGCTC TGCTTGCCAC CGGCCTGGCC TTTTTGGCCG TGTACGACGT TATCGCCCAA CGGGGCTCGT CCTACCGGCC GGAAATTTTC CATGCCGTGG TTCAGATGAT TGCCGCGCAC CCTTGGACTG GTCTTGGCCT GGGGGCTGAT TACGAGGTGA GCGCCGTCGG CATGCACTTC GATCACACCC ACAACATGTT CACCCATGTT GCCGTTGAGA TGGGCTTGCC CGGCATGTTG CTGTGGGTAA TGGTGTGGCT GTTCACGCTG GGCGAAATCG TGCGCGCCCG CGGCACCCTG TTCGGCAAGG TCCTGCTGGG CTTCTGGGTC TACTCGACCC TGGCCATGCA GTTCGATGCC GCCAGCCTCA CCGGTACGCC ACGTGCCGAA TGGTTCATCA GCTGGCTGCC GGTGGGCCTT GCCATGTTGC TGCCATGGGG GCGTGCCGAA AATGACGCCT GTGGTAAAAT TGCCGGTTCA ACCTGA
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Protein sequence | MLYQKNWAQA WLGLGLVWFL AAIALAPSNK VYQQGLVLFL WLPTLVLAWS ARGVLVQAWR RQPALWGSVL LLLAWSGLSL AWSPAEEPMR ELKRLLYILV FLLAFPLLAQ LGQARIRQLL LLGSALLAIA ALVSIIKFYG VQRAPLLFRL AGIGEISHPI LGAYVIGSAL LLMLYEPPRR RGLQLLWLAA LACLGAFAML SQSRGAVLAL VITVVMAPLW FRDRHSRVFS VLALLATGLA FLAVYDVIAQ RGSSYRPEIF HAVVQMIAAH PWTGLGLGAD YEVSAVGMHF DHTHNMFTHV AVEMGLPGML LWVMVWLFTL GEIVRARGTL FGKVLLGFWV YSTLAMQFDA ASLTGTPRAE WFISWLPVGL AMLLPWGRAE NDACGKIAGS T
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