Gene PP_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4900 
Symbol 
ID1041625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5570310 
End bp5571374 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content64% 
IMG OID637148301 
Productiron-sulfur cluster-binding protein, putative 
Protein accessionNP_747003 
Protein GI26991578 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID[TIGR00276] iron-sulfur cluster binding protein, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.705042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCT CTACACCTGA CCTCGCCCAA CTGGCCCAAT CGATCAAGAT TTGGGGCCAG 
GAACTCGGTT TTGCCCATGT TGGCATCGCC GGGGTCGACC TTGGCGAACA CGAACGCCAC
CTGCAGCGTT GGCTCGACGC CGGTTATCAG GGTGAAATGG AATACCTGGG CGCCCACGGC
AGCAAAAGGT CACATCCCGA CCAACTGATC CCCGGCACGG TACGCGTGGT CTCGCTACGT
ATGGACTACC TGCCCGGCGA CACGCAGATG GCGCAGCGCC TTGCCCAGCC CGAGAAGGCC
TACGTGTCAC GCTACGCGCT TGGCCGGGAT TACCACAAGC TGGTGCGCAA GCGCGTGCAG
TTCCTCGCCG ACCGCATCCA GGAAGCCATC GGCCCGTTCG GCTACCGCGC CTTCGTGGAC
AGCGCCCCGG TACTGGAAAA AGCCCTGGCC GAACAGGCCG GGCTGGGTTG GATCGGCAAG
AACACGCTGC TGCTCAACCG CAAAGCGGGC AGCTACTTCT TCCTTGCCGA ACTGTTCGTC
GACCTGCCGT TGCCGGTGGA CGAAGCCACC ACCAGCGAGC ACTGCGGGCG TTGCCAGGCC
TGCCTGGACA TCTGCCCGAC ACAAGCGTTT GTCGGGCCCT ATGTGCTGGA TGCGCGACGC
TGCATCTCGT ACCTGACCAT CGAGCTGAGG GGCGCGATCC CTGTCGAGTT ACGCGCAAAG
ATGGGCAACC GCGTGTTCGG TTGCGACGAC TGCCAGATCG TCTGCCCCTG GAACCGCTTT
GCCAGGCACA GTCAGGAGCA GGATTTCCAG CCACGGCATG GGCTGGAAAA TACCGACCTG
GCGGCGATGT TCCTGTGGGA TGAACGCACC TTCCTGCGCA AGACCGAGGG CGGGCCTTTG
CGGCGGGCGG GGTACGAGCG GTTCTTGCGC AACCTGGCGG TGGGGTTGGG CAATGCGCCC
TCCACGATTC CGGTGATCGA GGCGCTGAAG GCCAGGCGTG ACGATGAATC GGAATTGGTG
CGCGAGCATG TGGAGTGGGC GCTGGCCCGT CACGGAGCTC AATAG
 
Protein sequence
MSASTPDLAQ LAQSIKIWGQ ELGFAHVGIA GVDLGEHERH LQRWLDAGYQ GEMEYLGAHG 
SKRSHPDQLI PGTVRVVSLR MDYLPGDTQM AQRLAQPEKA YVSRYALGRD YHKLVRKRVQ
FLADRIQEAI GPFGYRAFVD SAPVLEKALA EQAGLGWIGK NTLLLNRKAG SYFFLAELFV
DLPLPVDEAT TSEHCGRCQA CLDICPTQAF VGPYVLDARR CISYLTIELR GAIPVELRAK
MGNRVFGCDD CQIVCPWNRF ARHSQEQDFQ PRHGLENTDL AAMFLWDERT FLRKTEGGPL
RRAGYERFLR NLAVGLGNAP STIPVIEALK ARRDDESELV REHVEWALAR HGAQ