Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4551 |
Symbol | |
ID | 1046175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5175196 |
End bp | 5176140 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637147949 |
Product | alpha/beta fold family hydrolase |
Protein accession | NP_746660 |
Protein GI | 26991235 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0902601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTCACG ACGCCTTCTG GCTGCCCGCC AGTGAGCACT GCAGCCTGTA CGTACACCAA TGGCTGCCGG CCACACCGGT AAAGGCCGTG GTGCTGCTGG CCCATGGCAT GGCCGAGCAT GCCGGGCGCT ACCAGCGCCT GGGCCAGGCT CTGAGCGAGG CCGGCTTTGC CCTGTTCGCT GCCGATCAGC GTGGCCACGG GCGCACTGCC GAACTGGGCA ACCTCGGCCT GTTCGCCCGC CATCATGGCT GGAATGCCGT GGTCAATGAC CTGGGGTGTG TGGCCCAGCA CATCGGCCAG CAGTTCCCGT GCACGCCGCT GTTCCTGTTC GGCCACAGCA TGGGCAGCTA CATCGCCCAG GCGTACCTGC TGCATCACAG TGGCAGCCTG CACGGGGCGA TCCTTAGCGG TTCCAACTAC CAACCGGCCG TGCTGTACCG CTTTGCGCGG CTGATTGCCC GGCTGGAGTC CTGGCGCCAG GGGCCACTGG GCAAGAGTGC ACTGATCGAA TGGTTGTCCT TCGGTTCGTT CAACAACGCC TTCAAGCCCA ACCGCACGGC CTTCGACTGG CTCAGCCGCG ACCCGGGCGA GGTCGATCAG TACGTGAATG ACCCGTTGTG CGGCTTTCGC TGCACCAACC AGTTGTGGCT CGATCTGCTG CAGGGCTTGG CGCAGATCAG TCAGCCGGGT AACCTCGCGC AGATCGATCC CAACCTGCCG ATGCTGGTGA TCGGCGGTGA ATGTGATCCG GTCAGTGCCG GCAAGCGTCT CACCCATCTG GCCGACGCCC TGCGCGCGAC CGGCAACCGA CATGTACAGC TGCGCGTCTA TCCTGAGGCG CGGCATGAAG TACTCAACGA AACCAACCGT GGCGAGGTCA TCGCCGATAT TCTCGGCTGG CTGGAACAGG CGCTGGCCCT TGGCCGCCCT GCGCGCAGTG AATGA
|
Protein sequence | MPHDAFWLPA SEHCSLYVHQ WLPATPVKAV VLLAHGMAEH AGRYQRLGQA LSEAGFALFA ADQRGHGRTA ELGNLGLFAR HHGWNAVVND LGCVAQHIGQ QFPCTPLFLF GHSMGSYIAQ AYLLHHSGSL HGAILSGSNY QPAVLYRFAR LIARLESWRQ GPLGKSALIE WLSFGSFNNA FKPNRTAFDW LSRDPGEVDQ YVNDPLCGFR CTNQLWLDLL QGLAQISQPG NLAQIDPNLP MLVIGGECDP VSAGKRLTHL ADALRATGNR HVQLRVYPEA RHEVLNETNR GEVIADILGW LEQALALGRP ARSE
|
| |