| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4539 |
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| Symbol | |
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| ID | 1046184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5155540 |
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| End bp | 5156463 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637147937 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_746648 |
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| Protein GI | 26991223 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.28189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC CGCGCGTAAC CCTTGACCAG TGGCGAACCC TGCAAGCAGT GGTCGATCAC
GGCGGGTTTG CCCAGGCCGC CGAGGCCTTG CACCGCTCGC AGTCATCGGT CAGCTACACC
GTGGCCCGCA TGCAGGAGCA GCTGGGCGTC CCGCTGTTGC GCATCGATGG CCGCAAGGCG
GTGCTGACCG AGGCCGGCAA TGTGCTGCTG CGCCGCTCGC GCCACCTGGT CAAGCAGGCC
AGCCAGCTCG AAGACCTGGC CCACCACATG GAACAGGGCT GGGAAGCCGA GGTGCGCCTG
GTGGTCGATG CCGCCTACCC CAGCGCCCGC CTGGTGCGCG CGCTGGCTGC GTTCATGCCA
CAAAGCCGTG GCTGCCGGGT GCGCCTGCGT GAAGAAGTGC TGTCTGGCGT GGAGGAAGTG
ATGCACGAAG GCATCGCCGA CCTGGCCATC AGCAGCTACA GCATCGGCGG CTACCTGGGC
GCCGAATTGA GCGCAGTGGA ATTCATCGCC GTCGCCCACC CCGAACACAG CCTGCACCGC
CTGGGACGCG AACTGACCTT CCAGGACCTG GAAAGCCAGC TGCAGGTGGT GATTCGTGAC
TCCGGCCGCG CCCAACCGCG CGACGTCGGC TGGCTGGGCG CCGAGCAGCG CTGGACCGTC
GGCAGCCTGG GCACCGCCGC CACCTTCGTC AGCAGCGGCC TGGGCTTTGC CTGGCTGCCC
CGTCACATGA TCGAGCGCGA GCTGCGCGAA GGCGTGCTCA AGCCATTGCC GCTGGATCAG
GGTGGCAGCC GCCACCCACT GTTCTACCTT TATTCGAGCA AAGAGAAGAC CCTGGGCCCG
GCCACGCAGA TTCTCATCGA CCTGCTGCGC AATTTCGACA CCGCGCCACT GGACGTGCCC
TTCGCAGCCC CCCCACAAGC CTGA
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| Protein sequence | MKAPRVTLDQ WRTLQAVVDH GGFAQAAEAL HRSQSSVSYT VARMQEQLGV PLLRIDGRKA
VLTEAGNVLL RRSRHLVKQA SQLEDLAHHM EQGWEAEVRL VVDAAYPSAR LVRALAAFMP
QSRGCRVRLR EEVLSGVEEV MHEGIADLAI SSYSIGGYLG AELSAVEFIA VAHPEHSLHR
LGRELTFQDL ESQLQVVIRD SGRAQPRDVG WLGAEQRWTV GSLGTAATFV SSGLGFAWLP
RHMIERELRE GVLKPLPLDQ GGSRHPLFYL YSSKEKTLGP ATQILIDLLR NFDTAPLDVP
FAAPPQA
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