| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4371 |
|---|
| Symbol | fleR |
|---|
| ID | 1041972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4961081 |
|---|
| End bp | 4962436 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637147767 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | NP_746485 |
|---|
| Protein GI | 26991060 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.109269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.91149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA AGGTGCTGCT GGTCGAGGAT GACCGCGTAT TGCGCCAGGC GCTGGGCGAT
ACCCTGGAAA TCGGCGGTTT CGCCTACCAG GCAGTGGGCA GTGCCGAAGA AGCGCTGGAG
GCCGTACTCG AAGACGCGTT CAGCCTGGTG GTCAGTGACG TCAACATGCC CGGTATGGAT
GGGCACCAGT TGCTGAGCCA GTTGCGCCGC CAGCAGCCAC AGTTGCCGGT GCTGTTGATG
ACGGCGCATG CCGCCGTCGA GCGTGCGGTC GAGGCCATGC GCCAAGGCGC CGCCGACTAC
CTGGTCAAAC CGTTCGAGCC CAAGGCGCTG CTCAACCTCG TGGAGCGGCA TGCCGCCGGG
CGTGTGACCG GCGAAGAAGG GCCGGTGGCC TGCGAGCCGG CCAGTCGCCA GTTGCTGGAG
CTGGCGGCCC GTGTGGCGCG CAGTGACTCG ACCGTACTGA TTTCCGGCGA GTCCGGTACT
GGCAAGGAAG TGCTGGCGCG CTACATTCAC CAGCAGTCGC CGCGTGCGGC GCAGCCCTTC
GTGGCGATCA ACTGCGCGGC GATCCCCGAC AACATGCTCG AGGCCACCCT GTTCGGCCAC
GAGAAGGGCG CCTTCACCGG CGCTATCGCG GCTCAGGCTG GCAAGTTCGA GCAGGCCGAA
GGCGGCACCT TGCTGCTCGA CGAAATCTCG GAAATGCCCA TGGCCTTGCA GGCCAAGCTG
CTGCGTGTGC TGCAGGAACG CGAGGTGGAG CGGGTAGGCG GGCGCAAGCC GATCAGCCTG
GACATTAGGG TGCTGGCCAC CACCAACCGC GACCTGGCCG GCGAAGTGGC GGCTGGGCGC
TTCCGCGAAG ACCTGTACTA CCGCCTGTCG GTGTTCCCGC TGGCCTGGCG CCCGCTGCGT
GAGCGGCCGG GCGATATCCT GCAGTTGGCC GAGCGCCTGC TGGCGCGCCA TGTGGCCAAG
ATGAAGCATG CCTCGGTGCG CCTCTCGCCA GCGGCTCGGG CCTGCCTGCA GGCATATGCC
TGGCCGGGCA ACGTGCGCGA ACTGGACAAC GCCCTGCAGC GGGCGTTGAT TCTGCAGCAG
GGTGGCGTGA TCGAGGCGGC GGATTTTTGT CTGGCAGGCG CCATTCCATT GTCGGCTGGC
ACCGAGCCAT CTCTCGAGGT GGTTGCTGAT GCCGGCGGCC TGGGGGATGA CATGCGTCGT
CACGAGTACC AGATGATCAT CGACACCCTG CGCGCCGAGC GCGGCCGCCG CAAAGAGGCG
GCCGAACGCC TGGGGATCAG TCCGCGGACG TTGCGCTACA AGCTGGCGCA GATGCGCGAT
GCCGGGTTTG ACGTCGAGGC CAGCCTGTTC GGCTGA
|
|---|
| Protein sequence | MAIKVLLVED DRVLRQALGD TLEIGGFAYQ AVGSAEEALE AVLEDAFSLV VSDVNMPGMD
GHQLLSQLRR QQPQLPVLLM TAHAAVERAV EAMRQGAADY LVKPFEPKAL LNLVERHAAG
RVTGEEGPVA CEPASRQLLE LAARVARSDS TVLISGESGT GKEVLARYIH QQSPRAAQPF
VAINCAAIPD NMLEATLFGH EKGAFTGAIA AQAGKFEQAE GGTLLLDEIS EMPMALQAKL
LRVLQEREVE RVGGRKPISL DIRVLATTNR DLAGEVAAGR FREDLYYRLS VFPLAWRPLR
ERPGDILQLA ERLLARHVAK MKHASVRLSP AARACLQAYA WPGNVRELDN ALQRALILQQ
GGVIEAADFC LAGAIPLSAG TEPSLEVVAD AGGLGDDMRR HEYQMIIDTL RAERGRRKEA
AERLGISPRT LRYKLAQMRD AGFDVEASLF G
|
|---|
| |