Gene PP_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4293 
Symbol 
ID1041773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4883551 
End bp4884333 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID637147691 
Producthypothetical protein 
Protein accessionNP_746409 
Protein GI26990984 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3248] Nucleoside-binding outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTA TCAAGAGCCT GATCCTCGCC GGCGGCCTGC TGGCCTGCGG CACCACCTTC 
GGCGGCGACC TGCTGCAATG GCAGAACAAC AGCCTGACCT ACCTGTGGGG CAAGAACTTC
AAGGTCAACC CGGCGATTCA GCAAACCGTC ACCTTCGAGC ACGCCGATGG CTGGAAGTAT
GGCGACAACT TCATTTTCGT CGACAAGATC TTCTACCAGG GCCAGAAAGA CGCCGGCAAC
GGCCCGAACA CCTACTACGG TGAGATCAGC CCACGCCTGT CGTTCGGCAA GATTTTCGAC
CAGAAGATCG AGTTTGGCCC GGTCAAGGAC GTGCTGCTGG CAATGACCTA CGAGTTTGGC
GAGGGTGACA CCGAGTCCTA CCTGATCGGC CCGGGCTTCG ACCTGGCCAT CCCGGGCTTC
GACTACTTCC AGCTGAACTT CTACAACCGC ACCACCGACG GCAGCCGCGC CGGTGACAAC
GTGTGGCAGA TCACCCCGGT GTGGTCGTAC ACCATTCCGG TCGGCGATTC CGACGTGCTG
ATCGACGGTT TCATGGACTG GGTGGTGGAC AACGACGAGA ACCGCCGCGG CACCTACCAG
GCCAACCTGC ACTTCAACCC GCAGATCAAG TACGACCTGG GCAAGGCATT GCACCTGGGT
GAGAAACAGC TGTACGTGGG TGTGGAGTAT GACTACTGGA AGAACAAGTA CGGCATCAAG
GACAGCGATG CCTTCACTAC CGACCAGAAC ACCATGAGCT TCTTGGTCAA GGTTCACTTC
TGA
 
Protein sequence
MRTIKSLILA GGLLACGTTF GGDLLQWQNN SLTYLWGKNF KVNPAIQQTV TFEHADGWKY 
GDNFIFVDKI FYQGQKDAGN GPNTYYGEIS PRLSFGKIFD QKIEFGPVKD VLLAMTYEFG
EGDTESYLIG PGFDLAIPGF DYFQLNFYNR TTDGSRAGDN VWQITPVWSY TIPVGDSDVL
IDGFMDWVVD NDENRRGTYQ ANLHFNPQIK YDLGKALHLG EKQLYVGVEY DYWKNKYGIK
DSDAFTTDQN TMSFLVKVHF