Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4171 |
Symbol | |
ID | 1042364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4711768 |
End bp | 4713882 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147570 |
Product | hypothetical protein |
Protein accession | NP_746288 |
Protein GI | 26990863 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCCCTG GCACGCCCCC GTACCCGCGC CTGCTGTTAT TGACCGCCCT GCTCGGCGGT CAGGCCGTGG CCGACGACCT GTTCATCGAC AACACCGACC TGCCACAGGT TCTGACCGCC ACACGCCTGA AACAATCCCC CGCCGCTGTC CCGGGCAGCA TGACCGTACT CGACAGCGAA CTGATTCGCG CCAGCGGTGC CCGTGACATC CCCGAACTGC TGCGCCTGGT ACCGGGCATG ATGATCGGCT ACGGTGCCGG TAATCAACCC ACGGTCAACT ACCACGGCAG CAACGTCAAC GACGCACGGC GCATGCAGGT ATTGATCGAT GGCCGCTCGG TATACCGCGC AGGCCTGGCC ACGGTGGACT GGAGCGACAT CCCCTTGGCC ATGGAGGATA TCGAGCGCAT CGAGGTGTTT CGTGGCCCGA ATACCGTCAG CTATGGCGCC AACGCGCTGA TGGCGGTGGT CAACATCCTC ACCCGCAAAC CCGCCGACAG CCATGGTACG CGGCTGAAAG TGACACGCGG CCAGGACGGT ATCAACGACT TCTATGCCAG CCACGGCTTG GGCTGGGACG GTGGCGACAT GCGCCTGTCG CTGTCGGGCC AACAGGACGA CGGCTTCGAT GAGAACCAGT TCGGCCAGGA CTACCGCGAC AGCCGCCGCC TGACCCGCTT CAACCTCAGC GCCAACCACA ACCTGGCGGT CGACCAGACC CTGGAGTGGC AACTGGCGGC CAAGGAAGGC AGCAATCAGC GGCCCTACAC CTACCAACCG GTGTTCCAGC AGTACGAGTC CGGGAACAAT GCCGACGTCA ACGCCAAGGA CTATGCGGGC TCGTTGCGCT GGACCAAGGA CTTCAGCGCT GAACACAGCC TTTATATCCA GGGTTCAGCC CAGCATTTTG ATCGCCAGCA AGTGTGGCGC GCCTGTGATG CCTTGCAGTC GTTCAGCCCC GAACTGACCC AGCTCTGGCA GATGAACCCC GACTTCGCCG AAAAAGTGGC GCGCGGCATT GCGACTGGCG CCCCCCTTTC CACTGATGAC CCTGCCATGA AAGGGCTTCT GCAGAAAGTG CAGCAGCAAT GGGAGCAGGG AGGACAGGAG CAGGTCTGCG GCGATGTCGA TCAGAGCACC CGTGAAACCC GCTATGACCT GGAAATCCAG GACACCCTGA GCCTGACCGA CAGCCTGCGC CTGCTCAGTG GCATGAACTA CCGCTATGAT CGCGCCGACT CGCAGACTTA CTTCAACGGC AGCATCGACG ACCAGACCTG GCGCCTGTTC GGCCAGCTGG AATGGCGGGC CGACGAGCAC TGGATACTGC AAGGTGGGGC CATGTTCGAA GACTCGCGCC TGTCTGGCAG TTCGCTGACC CCGCGCGTTG CGGTCAACTA CCTGATCACC CCGCGCCACG GCCTGCGTGC GGTGTACTCC GAAGCGGTGC GCTCGCCCGA CATGTTCGAG AACAACGTCA ACTGGAGTTA CACGGTCAAG AACCTCACCC CCAATTCATT CGGCCTGCAA AACGGTGAGT ACTTCGTCAA GACCCGTGGC CCTGGCGACC TTGAACAGGA GCGCATGCGC TCGCGCGAGC TAGGCTACAA CGGCTACTTC AGCGACCTCG ACCTGAGCCT GGATGTGAAG CTGTTCTACG ACGAGATCAC CGGCATGATC AGCGAGCCTC TGAGGAACAA TCAGTACATC GCCAGCAACG CCAACAAGGC CCGTTTCAGC GGCAGCGAGG CGCAAATGGA CTGGCGCCCC ACCCTGCGCG ACCGCCTGCG CCTGACCTAT GCCTACGTCG ATGCCTGGGC CAGCAACCCC GACGACCGTC GCCTCAGCGC CCGCAACAGC GGCTCGGCCG GGTGGATGCG CGAATGGGGT GCCGGCTGGT CGAGCGCGCT GTTCTATTAC GGTGACGATG CCCTCAACCA GTACCGCTAC GAGCGTCTGG ACCTGCGCCT GGCCAAGCGT TTTCGGGTGT ATGGCAGCAA CCTGGAGCTG GCGGCGCTGT GGCAGCAGCG CCTGGACGAT GAACCCACCT CGGCCCTGCA GAACCGCTAC GACAGCCGTC ACCGCCTGAG CGTGAGCGCG GAGCTGGAGT TCTGA
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Protein sequence | MFPGTPPYPR LLLLTALLGG QAVADDLFID NTDLPQVLTA TRLKQSPAAV PGSMTVLDSE LIRASGARDI PELLRLVPGM MIGYGAGNQP TVNYHGSNVN DARRMQVLID GRSVYRAGLA TVDWSDIPLA MEDIERIEVF RGPNTVSYGA NALMAVVNIL TRKPADSHGT RLKVTRGQDG INDFYASHGL GWDGGDMRLS LSGQQDDGFD ENQFGQDYRD SRRLTRFNLS ANHNLAVDQT LEWQLAAKEG SNQRPYTYQP VFQQYESGNN ADVNAKDYAG SLRWTKDFSA EHSLYIQGSA QHFDRQQVWR ACDALQSFSP ELTQLWQMNP DFAEKVARGI ATGAPLSTDD PAMKGLLQKV QQQWEQGGQE QVCGDVDQST RETRYDLEIQ DTLSLTDSLR LLSGMNYRYD RADSQTYFNG SIDDQTWRLF GQLEWRADEH WILQGGAMFE DSRLSGSSLT PRVAVNYLIT PRHGLRAVYS EAVRSPDMFE NNVNWSYTVK NLTPNSFGLQ NGEYFVKTRG PGDLEQERMR SRELGYNGYF SDLDLSLDVK LFYDEITGMI SEPLRNNQYI ASNANKARFS GSEAQMDWRP TLRDRLRLTY AYVDAWASNP DDRRLSARNS GSAGWMREWG AGWSSALFYY GDDALNQYRY ERLDLRLAKR FRVYGSNLEL AALWQQRLDD EPTSALQNRY DSRHRLSVSA ELEF
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