Gene PP_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4171 
Symbol 
ID1042364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4711768 
End bp4713882 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content63% 
IMG OID637147570 
Producthypothetical protein 
Protein accessionNP_746288 
Protein GI26990863 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCCTG GCACGCCCCC GTACCCGCGC CTGCTGTTAT TGACCGCCCT GCTCGGCGGT 
CAGGCCGTGG CCGACGACCT GTTCATCGAC AACACCGACC TGCCACAGGT TCTGACCGCC
ACACGCCTGA AACAATCCCC CGCCGCTGTC CCGGGCAGCA TGACCGTACT CGACAGCGAA
CTGATTCGCG CCAGCGGTGC CCGTGACATC CCCGAACTGC TGCGCCTGGT ACCGGGCATG
ATGATCGGCT ACGGTGCCGG TAATCAACCC ACGGTCAACT ACCACGGCAG CAACGTCAAC
GACGCACGGC GCATGCAGGT ATTGATCGAT GGCCGCTCGG TATACCGCGC AGGCCTGGCC
ACGGTGGACT GGAGCGACAT CCCCTTGGCC ATGGAGGATA TCGAGCGCAT CGAGGTGTTT
CGTGGCCCGA ATACCGTCAG CTATGGCGCC AACGCGCTGA TGGCGGTGGT CAACATCCTC
ACCCGCAAAC CCGCCGACAG CCATGGTACG CGGCTGAAAG TGACACGCGG CCAGGACGGT
ATCAACGACT TCTATGCCAG CCACGGCTTG GGCTGGGACG GTGGCGACAT GCGCCTGTCG
CTGTCGGGCC AACAGGACGA CGGCTTCGAT GAGAACCAGT TCGGCCAGGA CTACCGCGAC
AGCCGCCGCC TGACCCGCTT CAACCTCAGC GCCAACCACA ACCTGGCGGT CGACCAGACC
CTGGAGTGGC AACTGGCGGC CAAGGAAGGC AGCAATCAGC GGCCCTACAC CTACCAACCG
GTGTTCCAGC AGTACGAGTC CGGGAACAAT GCCGACGTCA ACGCCAAGGA CTATGCGGGC
TCGTTGCGCT GGACCAAGGA CTTCAGCGCT GAACACAGCC TTTATATCCA GGGTTCAGCC
CAGCATTTTG ATCGCCAGCA AGTGTGGCGC GCCTGTGATG CCTTGCAGTC GTTCAGCCCC
GAACTGACCC AGCTCTGGCA GATGAACCCC GACTTCGCCG AAAAAGTGGC GCGCGGCATT
GCGACTGGCG CCCCCCTTTC CACTGATGAC CCTGCCATGA AAGGGCTTCT GCAGAAAGTG
CAGCAGCAAT GGGAGCAGGG AGGACAGGAG CAGGTCTGCG GCGATGTCGA TCAGAGCACC
CGTGAAACCC GCTATGACCT GGAAATCCAG GACACCCTGA GCCTGACCGA CAGCCTGCGC
CTGCTCAGTG GCATGAACTA CCGCTATGAT CGCGCCGACT CGCAGACTTA CTTCAACGGC
AGCATCGACG ACCAGACCTG GCGCCTGTTC GGCCAGCTGG AATGGCGGGC CGACGAGCAC
TGGATACTGC AAGGTGGGGC CATGTTCGAA GACTCGCGCC TGTCTGGCAG TTCGCTGACC
CCGCGCGTTG CGGTCAACTA CCTGATCACC CCGCGCCACG GCCTGCGTGC GGTGTACTCC
GAAGCGGTGC GCTCGCCCGA CATGTTCGAG AACAACGTCA ACTGGAGTTA CACGGTCAAG
AACCTCACCC CCAATTCATT CGGCCTGCAA AACGGTGAGT ACTTCGTCAA GACCCGTGGC
CCTGGCGACC TTGAACAGGA GCGCATGCGC TCGCGCGAGC TAGGCTACAA CGGCTACTTC
AGCGACCTCG ACCTGAGCCT GGATGTGAAG CTGTTCTACG ACGAGATCAC CGGCATGATC
AGCGAGCCTC TGAGGAACAA TCAGTACATC GCCAGCAACG CCAACAAGGC CCGTTTCAGC
GGCAGCGAGG CGCAAATGGA CTGGCGCCCC ACCCTGCGCG ACCGCCTGCG CCTGACCTAT
GCCTACGTCG ATGCCTGGGC CAGCAACCCC GACGACCGTC GCCTCAGCGC CCGCAACAGC
GGCTCGGCCG GGTGGATGCG CGAATGGGGT GCCGGCTGGT CGAGCGCGCT GTTCTATTAC
GGTGACGATG CCCTCAACCA GTACCGCTAC GAGCGTCTGG ACCTGCGCCT GGCCAAGCGT
TTTCGGGTGT ATGGCAGCAA CCTGGAGCTG GCGGCGCTGT GGCAGCAGCG CCTGGACGAT
GAACCCACCT CGGCCCTGCA GAACCGCTAC GACAGCCGTC ACCGCCTGAG CGTGAGCGCG
GAGCTGGAGT TCTGA
 
Protein sequence
MFPGTPPYPR LLLLTALLGG QAVADDLFID NTDLPQVLTA TRLKQSPAAV PGSMTVLDSE 
LIRASGARDI PELLRLVPGM MIGYGAGNQP TVNYHGSNVN DARRMQVLID GRSVYRAGLA
TVDWSDIPLA MEDIERIEVF RGPNTVSYGA NALMAVVNIL TRKPADSHGT RLKVTRGQDG
INDFYASHGL GWDGGDMRLS LSGQQDDGFD ENQFGQDYRD SRRLTRFNLS ANHNLAVDQT
LEWQLAAKEG SNQRPYTYQP VFQQYESGNN ADVNAKDYAG SLRWTKDFSA EHSLYIQGSA
QHFDRQQVWR ACDALQSFSP ELTQLWQMNP DFAEKVARGI ATGAPLSTDD PAMKGLLQKV
QQQWEQGGQE QVCGDVDQST RETRYDLEIQ DTLSLTDSLR LLSGMNYRYD RADSQTYFNG
SIDDQTWRLF GQLEWRADEH WILQGGAMFE DSRLSGSSLT PRVAVNYLIT PRHGLRAVYS
EAVRSPDMFE NNVNWSYTVK NLTPNSFGLQ NGEYFVKTRG PGDLEQERMR SRELGYNGYF
SDLDLSLDVK LFYDEITGMI SEPLRNNQYI ASNANKARFS GSEAQMDWRP TLRDRLRLTY
AYVDAWASNP DDRRLSARNS GSAGWMREWG AGWSSALFYY GDDALNQYRY ERLDLRLAKR
FRVYGSNLEL AALWQQRLDD EPTSALQNRY DSRHRLSVSA ELEF