Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4029 |
Symbol | nudC |
ID | 1042077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4539451 |
End bp | 4540281 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147438 |
Product | NADH pyrophosphatase |
Protein accession | NP_746157 |
Protein GI | 26990732 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.459917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAC GCTGGACTAC TGCAGTACTC GACCCACAGA TGACCGGGGG GCTAGCCGTG GCCCGCAGCC CTGAAGGGTT TCTGGTGGAC GCCAACGGCG CGCTGTTCCC CCGCGACTGG CTAAAGCGCC AGGACCTCGA CGTGCTGTGC GAGCATGGCA TCGGCCACTT TGACGGCCAG CCGGTGTTCC TGCTGGAACT GCGCAGCGCC ACTGATGTGC CAGGCTGCAG CTGGCGCGGC CTGCGTGCGT TCATGCTCGA AGGCGACTTC GACACCTACA AGGTGCTGGG CTATGCCGCA CAGATCGGCA CCTGGGCCCG CGAGCATCGC TTCTGCGGCA GTTGCGGCCA GCCGATGACG CAAATTCGCT GGGAGCGGGC GATGTATTGC CAACCCTGCG ACCTGCGCAG CTATCCGCGA ATTTCACCCA GCATGATCGT GCTGGTGACC CGCGGCGATG AAATCCTGCT GGCGCGTTCG CCGCGCTTCG TCACCGGGGT GTACAGCACC TTGGCAGGTT TTGCCGAACC GGGTGAATCG GCCGAAGACT GCCTGGTGCG CGAAGTGCGC GAAGAAGTGG CGGTGGAGGT GAAGAACATT CAGTACGTCG GCAGCCAGTG CTGGCCGTTT CCGCATTCGA TGATGCTCGG TTTCCATGCC GAGTACGCCG GTGGCGAGAT TGTCATGCAA CCGGACGAGA TCGAGGACGC CAAGTGGTTC AGCGTCCACG ACTTGCCGCC GCTGCCGGCC GGGCGGTCCA TTGCCCGTTA TCTGATCGAT CTGTATGTTG CGCGGCGGCT GGGCTGTGAT ATCCCGGCTT TCCCGTCCTA G
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Protein sequence | MSARWTTAVL DPQMTGGLAV ARSPEGFLVD ANGALFPRDW LKRQDLDVLC EHGIGHFDGQ PVFLLELRSA TDVPGCSWRG LRAFMLEGDF DTYKVLGYAA QIGTWAREHR FCGSCGQPMT QIRWERAMYC QPCDLRSYPR ISPSMIVLVT RGDEILLARS PRFVTGVYST LAGFAEPGES AEDCLVREVR EEVAVEVKNI QYVGSQCWPF PHSMMLGFHA EYAGGEIVMQ PDEIEDAKWF SVHDLPPLPA GRSIARYLID LYVARRLGCD IPAFPS
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