| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3979 |
|---|
| Symbol | |
|---|
| ID | 1046584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4486395 |
|---|
| End bp | 4486715 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637147389 |
|---|
| Product | ISPpu14, transposase Orf1 |
|---|
| Protein accession | NP_746109 |
|---|
| Protein GI | 26990684 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.061856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAAC GAAGCTCTTA TCCGAAACCG TTCAAAGCCC AGGTCGTTCA GGAATGCCTG
CAACCTGGCG CAACCGTGTC CAGTGTCGCC ATCAACCACG GCATCAATGC CAACGTCATC
CGCAAATGGC TGCCGCTCTA TCGAGATCAG CCCGCAGCGG CTTCACTACC AGCTTTCGTC
CCGCTAAAAG CCGCACCTAA ACGGCCAGTC GAAGCGTCAG TGATCATCGA GTTGCCCGTG
GCCGGGCAAG TGATCACGGT GAAATGGCCA GCCTCGGATC CCGAGGGTTG TGCGCAATTT
ATTCGGGCTT TCGCTCAATG A
|
|---|
| Protein sequence | MRQRSSYPKP FKAQVVQECL QPGATVSSVA INHGINANVI RKWLPLYRDQ PAAASLPAFV
PLKAAPKRPV EASVIIELPV AGQVITVKWP ASDPEGCAQF IRAFAQ
|
|---|
| |